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Trappc2
Gene Detail
 Symbol
Name
ID
Trappc2
trafficking protein particle complex 2
MGI:1913476
Synonyms 1110066L09Rik, 1810064C02Rik, MIP-2A, Sedl, TRS20
Feature Type protein coding gene
Genetic Map
Chromosome X
77.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:166440574-166453140 bp, + strand
From VEGA annotation of GRCm38

  12567 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5436  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 2 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: trafficking protein particle complex protein 2
Gene Tree: Trappc2

Human
homologs
Human Homolog TRAPPC2, trafficking protein particle complex 2
NCBI Gene ID 6399
neXtProt AC  NX_P0DI81, NX_P0DI82
Human Synonyms  hYP38334, MIP2A, SEDL, SEDT, TRAPPC2P1, TRS20, ZNF547L
Human Chr (Location)  Xp22; chrX:13712242-13734635 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human TRAPPC2
Alleles
and
phenotypes
All alleles(7) : Targeted(4) Gene trapped(3)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process regulation of transcription, DNA-templated, skeletal system development
Component perinuclear region of cytoplasm, TRAPP complex
Function ion channel binding, protein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (34)    Tissues (6)    Images (19)
Theiler Stages: 23
Assay TypeResults
RNA in situ 34
cDNA source data(43)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(44) cDNA(44)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000019550 (Evidence)
Ensembl Gene ModelENSMUSG00000079317 (Evidence)
Entrez Gene66226 (Evidence)
UniGene279752
DFCITC1578058, TC1603123
NIA Mouse Gene IndexU020401, U057170
Consensus CDS ProjectCCDS41208.1
International Mouse Knockout Project StatusTrappc2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019550 VEGA Gene Model | MGI Sequence Detail 12567 C57BL/6J ±  kb
transcript OTTMUST00000046687 VEGA | MGI Sequence Detail 1613 Not Applicable 
polypeptide OTTMUSP00000021091 VEGA | MGI Sequence Detail 140 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(2)
Polymorphisms SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000030317 trafficking protein particle complex subunit 2
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:1917106, MGI:2148015

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory