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Bsdc1 Gene Detail
Summary
  • Symbol
    Bsdc1
  • Name
    BSD domain containing 1
  • Synonyms
    1110063F24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913466
    NCBI Gene: 100383
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:129461679-129488498 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 63.26 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    255 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913466
protein coding gene Chr4:129461581-129488498 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028823
protein coding gene Chr4:131385325-131411847 (+)
A/J MGP_AJ_G0028782
protein coding gene Chr4:126139663-126167112 (+)
AKR/J MGP_AKRJ_G0028735
protein coding gene Chr4:129645863-129673165 (+)
BALB/cJ MGP_BALBcJ_G0028805
protein coding gene Chr4:126731886-126762308 (+)
C3H/HeJ MGP_C3HHeJ_G0028519
protein coding gene Chr4:129706926-129737663 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029247
protein coding gene Chr4:136326459-136355126 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026520
protein coding gene Chr4:119272816-119297990 (+)
CAST/EiJ MGP_CASTEiJ_G0027952
protein coding gene Chr4:127884596-127911687 (+)
CBA/J MGP_CBAJ_G0028485
protein coding gene Chr4:139700978-139727733 (+)
DBA/2J MGP_DBA2J_G0028634
protein coding gene Chr4:126572368-126599196 (+)
FVB/NJ MGP_FVBNJ_G0028601
protein coding gene Chr4:125332003-125360075 (+)
LP/J MGP_LPJ_G0028735
protein coding gene Chr4:131662566-131689068 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028627
protein coding gene Chr4:144541750-144569563 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029285
protein coding gene Chr4:130023132-130051229 (+)
PWK/PhJ MGP_PWKPhJ_G0027673
protein coding gene Chr4:123166024-123194240 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027500
protein coding gene Chr4:125887945-125917091 (+)
WSB/EiJ MGP_WSBEiJ_G0028032
protein coding gene Chr4:130143794-130170214 (+)



Homology
more
  • Human Ortholog
    BSDC1, BSD domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    BSDC1, BSD domain containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 55108
    neXtProt AC: NX_Q9NW68
    UniProt: Q9NW68

  • Chr Location
    1p35.1; chr1:32364633-32394461 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32386
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: BSDC1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100383 NCBI Gene Model | MGI Sequence Detail 26820 C57BL/6J ±  kb
transcript NM_133889 RefSeq | MGI Sequence Detail 2684 C57BL/6  
polypeptide Q80Y55 UniProt | EBI | MGI Sequence Detail 427 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 90
    cDNA 90

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140541
References
more
  • Summaries
    All 37
    Phenotypes 16
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory