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1110059E24Rik
Gene Detail
Symbol

Name
ID
1110059E24Rik
RIKEN cDNA 1110059E24 gene
MGI:1913456
Feature Type
protein coding gene
Genetic Map
Chromosome 19
15.54 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:21581202-21652976 bp, - strand
From VEGA annotation of GRCm38

  71775 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11933  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: C9orf85
Gene Tree: 1110059E24Rik

Human
homologs
C9orf85, chromosome 9 open reading frame 85
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 138241
neXtProt AC: NX_Q96MD7

Human Chr (Location): 9q21.13; chr9:71911321-71973459 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(20) : Gene trapped(20)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
1110059E24Rik interacts with 170 markers (Mir1a-1, Mir1a-2, Mir19a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(70)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN zgc:101016    NEW 
Molecular
reagents
All nucleic(70) cDNA(70)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000042308 (Evidence)
Ensembl Gene Model ENSMUSG00000035171 (Evidence)
Entrez Gene 66206 (Evidence)
UniGene 272430
DFCI TC1577068
NIA Mouse Gene Index U038911
Consensus CDS Project CCDS29699.1
International Mouse Phenotyping Consortium Status 1110059E24Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042308 VEGA Gene Model | MGI Sequence Detail 71775 C57BL/6J ±  kb
transcript OTTMUST00000111323 VEGA | MGI Sequence Detail 1614 Not Applicable 
polypeptide OTTMUSP00000062296 VEGA | MGI Sequence Detail 155 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(2) UniProt(6)
Polymorphisms
SNPs within 2kb(730 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019351 Protein of unknown function DUF2039
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:110088 Taniwaki T, et al., Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. Dev Growth Differ. 2005 Apr;47(3):163-72
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory