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Commd4 Gene Detail
Summary
  • Symbol
    Commd4
  • Name
    COMM domain containing 4
  • Synonyms
    1110039H05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913449
    NCBI Gene: 66199
  • Gene Overview
    MyGene.info: COMMD4
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:57155035-57158331 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 30.89 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913449
protein coding gene Chr9:57155035-57158349 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034861
protein coding gene Chr9:56326387-56329645 (-)
A/J MGP_AJ_G0034842
protein coding gene Chr9:54513460-54516718 (-)
AKR/J MGP_AKRJ_G0034771
protein coding gene Chr9:55770547-55773805 (-)
BALB/cJ MGP_BALBcJ_G0034834
protein coding gene Chr9:54314393-54317651 (-)
C3H/HeJ MGP_C3HHeJ_G0034544
protein coding gene Chr9:56247478-56250736 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035353
protein coding gene Chr9:57913561-57916819 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032264
protein coding gene Chr9:53853170-53856444 (-)
CAST/EiJ MGP_CASTEiJ_G0033865
protein coding gene Chr9:56324055-56327289 (-)
CBA/J MGP_CBAJ_G0034515
protein coding gene Chr9:59937676-59940934 (-)
DBA/2J MGP_DBA2J_G0034674
protein coding gene Chr9:54394165-54397423 (-)
FVB/NJ MGP_FVBNJ_G0034616
protein coding gene Chr9:53616068-53619326 (-)
LP/J MGP_LPJ_G0034757
protein coding gene Chr9:56618927-56622185 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034659
protein coding gene Chr9:61412854-61416112 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035375
protein coding gene Chr9:55787553-55790811 (-)
PWK/PhJ MGP_PWKPhJ_G0033570
protein coding gene Chr9:54423509-54426771 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033404
protein coding gene Chr9:56079696-56082951 (-)
WSB/EiJ MGP_WSBEiJ_G0033978
protein coding gene Chr9:55723926-55727184 (-)



Homology
more
  • Human Ortholog
    COMMD4, COMM domain containing 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    COMMD4, COMM domain containing 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 54939
    neXtProt AC: NX_Q9H0A8
    UniProt: Q9H0A8

  • Chr Location
    15q24.2; chr15:75335996-75341927 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032299 Ensembl Gene Model | MGI Sequence Detail 3297 C57BL/6J ±  kb
transcript ENSMUST00000065358 Ensembl | MGI Sequence Detail 858 Not Applicable  
polypeptide ENSMUSP00000069078 Ensembl | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    8 Sequences
  • InterPro Domains
    IPR017920 COMM domain
    IPR037356 COMM domain-containing protein 4
Molecular
Reagents
less
  • All nucleic 88
    cDNA 88

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory