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Ccdc107 Gene Detail
Summary
  • Symbol
    Ccdc107
  • Name
    coiled-coil domain containing 107
  • Synonyms
    1110032O22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913423
    NCBI Gene: 622404
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:43493340-43495921 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 23.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913423
protein coding gene Chr4:43492900-43495921 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028208
protein coding gene Chr4:41610606-41613627 (+)
A/J MGP_AJ_G0028164
protein coding gene Chr4:40134793-40137814 (+)
AKR/J MGP_AKRJ_G0028116
protein coding gene Chr4:41047137-41050158 (+)
BALB/cJ MGP_BALBcJ_G0028184
protein coding gene Chr4:40222264-40225285 (+)
C3H/HeJ MGP_C3HHeJ_G0027906
protein coding gene Chr4:41672469-41675490 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028625
protein coding gene Chr4:43172051-43175072 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025937
protein coding gene Chr4:37581724-37584738 (+)
CAST/EiJ MGP_CASTEiJ_G0027346
protein coding gene Chr4:41176253-41179263 (+)
CBA/J MGP_CBAJ_G0027872
protein coding gene Chr4:44475755-44478776 (+)
DBA/2J MGP_DBA2J_G0028021
protein coding gene Chr4:40043288-40046309 (+)
FVB/NJ MGP_FVBNJ_G0027988
protein coding gene Chr4:39264650-39267671 (+)
LP/J MGP_LPJ_G0028120
protein coding gene Chr4:41661956-41664977 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028012
protein coding gene Chr4:47746087-47749108 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028661
protein coding gene Chr4:41240647-41243668 (+)
PWK/PhJ MGP_PWKPhJ_G0027072
protein coding gene Chr4:40087527-40090862 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026900
protein coding gene Chr4:40828041-40831021 (+)
WSB/EiJ MGP_WSBEiJ_G0027426
protein coding gene Chr4:41142399-41145420 (+)



Homology
more
  • Human Ortholog
    CCDC107, coiled-coil domain containing 107
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC107, coiled-coil domain containing 107
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PSEC0222
  • Links
    NCBI Gene ID: 203260
    neXtProt AC: NX_Q8WV48
    UniProt: Q8WV48

  • Chr Location
    9p13.3; chr9:35658282-35661503 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622404 NCBI Gene Model | MGI Sequence Detail 2582 C57BL/6J ±  kb
transcript NM_001037913 RefSeq | MGI Sequence Detail 814 C57BL/6  
polypeptide Q9DCC3 UniProt | EBI | MGI Sequence Detail 242 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    Genomic 1
    cDNA 27

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:178085 Rosenbluh J, et al., RMRP Is a Non-Coding RNA Essential for Early Murine Development. PLoS One. 2011;6(10):e26270

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory