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1110008L16Rik Gene Detail
Summary
  • Symbol
    1110008L16Rik
  • Name
    RIKEN cDNA 1110008L16 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913382
    NCBI Gene: 66132
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:55302637-55382492 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 23.91 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    330 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913382
protein coding gene Chr12:55299577-55382533 (.)
129S1/SvImJ MGP_129S1SvImJ_G0019747
protein coding gene Chr12:54336720-54424574 (+)
A/J MGP_AJ_G0019706
protein coding gene Chr12:52375812-52460671 (+)
AKR/J MGP_AKRJ_G0019681
protein coding gene Chr12:54042607-54131871 (+)
BALB/cJ MGP_BALBcJ_G0019686
protein coding gene Chr12:52747698-52835036 (+)
C3H/HeJ MGP_C3HHeJ_G0019491
protein coding gene Chr12:54087407-54189288 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020138
protein coding gene Chr12:55960295-56050989 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017758
protein coding gene Chr12:50487154-50973246 (+)
CAST/EiJ MGP_CASTEiJ_G0019043
protein coding gene Chr12:48941769-49040902 (+)
CBA/J MGP_CBAJ_G0019460
protein coding gene Chr12:57919377-58016050 (+)
DBA/2J MGP_DBA2J_G0019576
protein coding gene Chr12:52292013-52388469 (+)
FVB/NJ MGP_FVBNJ_G0019564
protein coding gene Chr12:51589910-51684755 (+)
LP/J MGP_LPJ_G0019648
protein coding gene Chr12:54255398-54419993 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019602
protein coding gene Chr12:59493295-59600046 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020172
protein coding gene Chr12:53487113-53571359 (+)
PWK/PhJ MGP_PWKPhJ_G0018810
protein coding gene Chr12:46646703-46733688 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018603
protein coding gene Chr12:47878118-47975358 (+)
WSB/EiJ MGP_WSBEiJ_G0019094
protein coding gene Chr12:53987892-54081585 (+)



Homology
more
  • Human Ortholog
    KIAA0391, KIAA0391
  • Vertebrate Orthologs
    9
  • Human Ortholog
    KIAA0391, KIAA0391
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MRPP3, PRORP
  • Links
    NCBI Gene ID: 9692
    neXtProt AC: NX_O15091
    UniProt: O15091

  • Chr Location
    14q13.2; chr14:35121855-35274078 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66132 NCBI Gene Model | MGI Sequence Detail 79856 C57BL/6J ±  kb
transcript NM_025373 RefSeq | MGI Sequence Detail 3117 C57BL/6  
polypeptide Q8JZY4 UniProt | EBI | MGI Sequence Detail 584 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • EC
  • InterPro Domains
    IPR033495 Mitochondrial ribonuclease P catalytic subunit
    IPR031595 Protein-only RNase P, C-terminal
    IPR011990 Tetratricopeptide-like helical domain superfamily
Molecular
Reagents
less
  • All nucleic 36
    cDNA 36

    Microarray probesets 3
References
more
  • Summaries
    All 31
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:213151 Bogenhagen DF, et al., Initial steps in RNA processing and ribosome assembly occur at mitochondrial DNA nucleoids. Cell Metab. 2014 Apr 1;19(4):618-29

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory