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Tspan13
Gene Detail
 Symbol
Name
ID
Tspan13
tetraspanin 13
MGI:1913359
Synonyms 1100001I23Rik, Tm4sf13
Feature Type protein coding gene
Genetic Map
Chromosome 12
16.25 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:36014557-36042500 bp, - strand
From VEGA annotation of GRCm38

  27944 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8671  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: tetraspanin
Gene Tree: Tspan13

Human
homologs
Human Homolog TSPAN13, tetraspanin 13
NCBI Gene ID 27075
neXtProt AC  NX_O95857
Human Synonyms  NET6, NET-6, TM4SF13
Human Chr (Location)  7p21.1; chr7:16753726-16784536 (+)  GRCh38
Alleles
and
phenotypes
All alleles(7) : Gene trapped(5) Targeted(2)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (154)    Tissues (41)    Images (23)
Theiler Stages: 23, 24, 26
Assay TypeResults
RNA in situ 154
cDNA source data(106)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(106) cDNA(106)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027581 (Evidence)
Ensembl Gene ModelENSMUSG00000020577 (Evidence)
Entrez Gene66109 (Evidence)
UniGene254663
DFCITC1572186
DoTSDT.494100
NIA Mouse Gene IndexU033902
Consensus CDS ProjectCCDS25882.1
International Mouse Knockout Project StatusTspan13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027581 VEGA Gene Model | MGI Sequence Detail 27944 C57BL/6J ±  kb
transcript OTTMUST00000068283 VEGA | MGI Sequence Detail 1932 Not Applicable 
polypeptide OTTMUSP00000034482 VEGA | MGI Sequence Detail 204 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(2) UniProt(3)
Polymorphisms SNPs within 2kb(221 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000301 Tetraspanin
InterPro IPR008952 Tetraspanin, EC2 domain
InterPro IPR018499 Tetraspanin/Peripherin
Protein Ontology PR:000016739 tetraspanin-13
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory