About   Help   FAQ
Tceal3 Gene Detail
Summary
  • Symbol
    Tceal3
  • Name
    transcription elongation factor A (SII)-like 3
  • Synonyms
    1100001D19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913354
    NCBI Gene: 594844
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:136590844-136668377 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 59.10 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    410 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913354
protein coding gene ChrX:136590842-136668378 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036101
protein coding gene ChrX:133990802-134047629 (+)
A/J MGP_AJ_G0036080
protein coding gene ChrX:133381919-133470397 (+)
AKR/J MGP_AKRJ_G0036006
protein coding gene ChrX:137655042-137711161 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036594
protein coding gene ChrX:137886212-137969225 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035068
protein coding gene ChrX:114818150-114887409 (+)
CBA/J MGP_CBAJ_G0035756
protein coding gene ChrX:142116776-142207565 (+)
DBA/2J MGP_DBA2J_G0035912
protein coding gene ChrX:132697770-132773110 (+)
FVB/NJ MGP_FVBNJ_G0035847
protein coding gene ChrX:131889931-131982385 (+)
LP/J MGP_LPJ_G0036007
protein coding gene ChrX:134964419-135026289 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035881
protein coding gene ChrX:149438262-149517734 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036632
protein coding gene ChrX:133344892-133416852 (+)
PWK/PhJ MGP_PWKPhJ_G0034761
protein coding gene ChrX:111855745-111922387 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034589
protein coding gene ChrX:115448113-115518034 (+)
WSB/EiJ MGP_WSBEiJ_G0035203
protein coding gene ChrX:131680335-131740583 (+)



Homology
more
  • Human Ortholog
    TCEAL3, transcription elongation factor A like 3
  • Vertebrate Orthologs
    5
  • Human Ortholog
    TCEAL3, transcription elongation factor A like 3
    Orthology source: HGNC
  • Synonyms
    WEX8
  • Links
    NCBI Gene ID: 85012
    neXtProt AC: NX_Q969E4
    UniProt: Q969E4

  • Chr Location
    Xq22.2; chrX:103607906-103609927 (+)  GRCh38.p7

  • Human Ortholog
    TCEAL6, transcription elongation factor A like 6
    Orthology source: HomoloGene
  • Synonyms
    Tceal3, WEX2
  • Links
    NCBI Gene ID: 158931
    UniProt: Q6IPX3

  • Chr Location
    Xq22.1; chrX:102139961-102142416 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 594844 NCBI Gene Model | MGI Sequence Detail 77534 C57BL/6J ±  kb
    transcript NM_001359277 RefSeq | MGI Sequence Detail 1193 C57BL/6  
    polypeptide Q8R0A5 UniProt | EBI | MGI Sequence Detail 200 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      3 Sequences
    • InterPro Domains
      IPR021156 Transcription elongation factor A-like/Brain expressed X-linked
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 13

      Microarray probesets 1
    References
    more
    • Summaries
      All 19
      Developmental Gene Expression 2
      Diseases 1
      Gene Ontology 1
      Phenotypes 3
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:199809 Clark K, et al., Gait abnormalities and progressive myelin degeneration in a new murine model of pelizaeus-merzbacher disease with tandem genomic duplication. J Neurosci. 2013 Jul 17;33(29):11788-99

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
    Warranty Disclaimer & Copyright Notice
    Send questions and comments to User Support.
    last database update
    03/19/2019
    MGI 6.13
    The Jackson Laboratory