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Chchd6 Gene Detail
Summary
  • Symbol
    Chchd6
  • Name
    coiled-coil-helix-coiled-coil-helix domain containing 6
  • Synonyms
    0710001P09Rik, 1700021B03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913348
    NCBI Gene: 66098
Location & Maps
more
  • Sequence Map
    Chr6:89383151-89595652 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      212502 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 39.91 cM, cytoband D2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CHCHD6, coiled-coil-helix-coiled-coil-helix domain containing 6
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CHCHD6, coiled-coil-helix-coiled-coil-helix domain containing 6
    Orthology source: HomoloGene
  • Synonyms
    CHCM1, Mic25, PPP1R23
  • Links
    NCBI Gene ID: 84303
    neXtProt AC: NX_Q9BRQ6

  • Chr Location
    3q21.3; chr3:126704220-126960420 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    10
  • Gene trapped
    8
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    1 involving Chchd6
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000057681 VEGA Gene Model | MGI Sequence Detail 212502 C57BL/6J ±  kb
transcript OTTMUST00000141723 VEGA | MGI Sequence Detail 1121 Not Applicable  
polypeptide OTTMUSP00000074006 VEGA | MGI Sequence Detail 273 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    534 from dbSNP Build 142
Protein
Information
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  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000029356 coiled-coil-helix-coiled-coil-helix domain-containing protein 6, mitochondrial
  • InterPro Domains
    IPR007964 Protein of unknown function DUF737
Molecular
Reagents
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  • All nucleic 60
    cDNA 60

    Microarray probesets 3
Other
Accession IDs
less
MGI:1916633
References
more
  • Summaries
    All 26
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory