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Snupn Gene Detail
Summary
  • Symbol
    Snupn
  • Name
    snurportin 1
  • Synonyms
    0610031A09Rik, Rnut1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913319
    NCBI Gene: 66069
  • Gene Overview
    MyGene.info: SNUPN
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:56950924-56983206 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 30.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913319
protein coding gene Chr9:56950878-56983206 (.)
129S1/SvImJ MGP_129S1SvImJ_G0034856
protein coding gene Chr9:56109533-56146012 (+)
A/J MGP_AJ_G0034837
protein coding gene Chr9:54306812-54339794 (+)
AKR/J MGP_AKRJ_G0034766
protein coding gene Chr9:55563989-55595813 (+)
BALB/cJ MGP_BALBcJ_G0034829
protein coding gene Chr9:54107808-54140761 (+)
C3H/HeJ MGP_C3HHeJ_G0034539
protein coding gene Chr9:56030451-56064850 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035348
protein coding gene Chr9:57687877-57724397 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032259
protein coding gene Chr9:53640296-53675253 (+)
CAST/EiJ MGP_CASTEiJ_G0033860
protein coding gene Chr9:56101525-56140786 (+)
CBA/J MGP_CBAJ_G0034510
protein coding gene Chr9:59689647-59742719 (+)
DBA/2J MGP_DBA2J_G0034669
protein coding gene Chr9:54188205-54220599 (+)
FVB/NJ MGP_FVBNJ_G0034611
protein coding gene Chr9:53409932-53442858 (+)
LP/J MGP_LPJ_G0034752
protein coding gene Chr9:56398947-56438752 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034654
protein coding gene Chr9:61174093-61220874 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035370
protein coding gene Chr9:55565318-55607998 (+)
PWK/PhJ MGP_PWKPhJ_G0033565
protein coding gene Chr9:54213324-54248787 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033399
protein coding gene Chr9:55855291-55895270 (+)
WSB/EiJ MGP_WSBEiJ_G0033973
protein coding gene Chr9:55505962-55542493 (+)



Homology
more
  • Human Ortholog
    SNUPN, snurportin 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SNUPN, snurportin 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KPNBL, RNUT1, Snurportin1
  • Links
    NCBI Gene ID: 10073
    neXtProt AC: NX_O95149
    UniProt: O95149

  • Chr Location
    15q24.2; chr15:75598083-75626378 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66069 NCBI Gene Model | MGI Sequence Detail 32283 C57BL/6J ±  kb
transcript NM_178374 RefSeq | MGI Sequence Detail 1354 C57BL/6  
polypeptide Q80W37 UniProt | EBI | MGI Sequence Detail 358 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 4
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory