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Rbm8a
Gene Detail
Symbol

Name
ID
Rbm8a
RNA binding motif protein 8a
MGI:1913129
Synonyms
2310057C03Rik, Rbm8
Feature Type
protein coding gene
Genetic Map
Chromosome 3
41.93 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:96629928-96633779 bp, + strand
From Ensembl annotation of GRCm38

  3852 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3744  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Rbm8a

Human
homologs
Human Homolog RBM8A, RNA binding motif protein 8A
NCBI Gene ID 9939
neXtProt AC  NX_Q9Y5S9
Human Synonyms  BOV-1A, BOV-1B, BOV-1C, C1DELq21.1, DEL1q21.1, MDS014, RBM8, RBM8B, TAR, Y14, ZNRP, ZRNP1
Human Chr (Location)  1q21.1; chr1:145921556-145927536 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RBM8A
Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(4) Targeted(3)
Incidental mutations (data from APF )
Interactions
Rbm8a interacts with 204 markers (Mir7-1, Mir7-2, Mir7b, ...)
Expression
Literature Summary: (2 records)
Data Summary: Results (23)    Tissues (23)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 21
RT-PCR 2
cDNA source data(79)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(81) Genomic(1) cDNA(79) Primer pair(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000038374 (Evidence)
Entrez Gene60365 (Evidence)
UniGene261972
DFCITC1611466, TC1575949, TC1673142
DoTSDT.483809, DT.101366684
Consensus CDS ProjectCCDS51005.1
International Mouse Knockout Project StatusRbm8a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038374 Ensembl Gene Model | MGI Sequence Detail 3852 C57BL/6J ±  kb
transcript ENSMUST00000048915 Ensembl | MGI Sequence Detail 2604 Not Applicable 
polypeptide ENSMUSP00000044548 Ensembl | MGI Sequence Detail 174 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(4)
Polymorphisms
SNPs within 2kb(21 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000013809 RNA-binding protein 8A
References
(Earliest) J:60627 Zhao XF, et al., MAGOH interacts with a novel RNA-binding protein. Genomics. 2000 Jan 1;63(1):145-8
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:1914219, MGI:2138122

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory