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Slc28a2
Gene Detail
Symbol

Name
ID
Slc28a2
solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
MGI:1913105
Synonyms
2010208B10Rik, CNT2
Feature Type
protein coding gene
Genetic Map
Chromosome 2
60.63 cM, cytoband E3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:122426477-122461137 bp, + strand
From VEGA annotation of GRCm38

  34661 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20891  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC28A2
Gene Tree: Slc28a2

Human
homologs
SLC28A2, solute carrier family 28 (concentrative nucleoside transporter), member 2
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 9153
neXtProt AC: NX_O43868

Human Synonyms: CNT2, HCNT2, HsT17153, SPNT1

Human Chr (Location): 15q15; chr15:45252066-45275934 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Slc28a2 interacts with 104 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (19)    Tissues (3)    Images (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 13
RT-PCR 6
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc28a2    NEW 
Molecular
reagents
All nucleic(12) Genomic(1) cDNA(9) Primer pair(2)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000015614 (Evidence)
Ensembl Gene Model ENSMUSG00000027219 (Evidence)
Entrez Gene 269346 (Evidence)
DFCI TC1580626, TC1736291
DoTS DT.531550
Consensus CDS Project CCDS16663.1
International Mouse Phenotyping Consortium Status Slc28a2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015614 VEGA Gene Model | MGI Sequence Detail 34661 C57BL/6J ±  kb
transcript OTTMUST00000037084 VEGA | MGI Sequence Detail 3911 Not Applicable 
polypeptide OTTMUSP00000016629 VEGA | MGI Sequence Detail 660 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(10) UniProt(3)
Polymorphisms
SNPs within 2kb(370 from dbSNP Build 137)    SNPs within 2kb including multiple locations(486)
Protein-related
information
ResourceIDDescription
InterPro IPR008276 Concentrative nucleoside transporter
InterPro IPR018270 Concentrative nucleoside transporter, metazoan/bacterial
InterPro IPR002668 Na dependent nucleoside transporter
InterPro IPR011657 Na dependent nucleoside transporter, C-terminal
InterPro IPR011642 Nucleoside recognition Gate
Protein Ontology PR:000015052 sodium/nucleoside cotransporter 2
References
(Earliest) J:65053 Patel DH, et al., Cloning, genomic organization and chromosomal localization of the gene encoding the murine sodium-dependent, purine-selective, concentrative nucleoside transporter (CNT2). Gene. 2000 Jan 25;242(1-2):51-8
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(29)
Other
accession IDs
MGI:1919339, MGI:2139438

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory