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Pcnx Gene Detail
Summary
  • Symbol
    Pcnx
  • Name
    pecanex homolog (Drosophila)
  • Synonyms
    2900024E21Rik, 3526401J03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891924
    NCBI Gene: 54604
  • Gene Overview
    MyGene.info: PCNX1
Location & Maps
more
  • Sequence Map
    Chr12:81860030-82000924 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      140895 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 37.98 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PCNX1, pecanex homolog 1 (Drosophila)
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PCNX1, pecanex homolog 1 (Drosophila)
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PCNX, PCNXL1, pecanex
  • Links
    NCBI Gene ID: 22990
    neXtProt AC: NX_Q96RV3

  • Chr Location
    14q24.2; chr14:70907405-71115382 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 40997
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: PCNX1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    1
  • Chemically induced (other)
    1
  • Genomic Mutations
    1 involving Pcnx
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021140 Ensembl Gene Model | MGI Sequence Detail 140895 C57BL/6J ±  kb
transcript ENSMUST00000021567 Ensembl | MGI Sequence Detail 12139 Not Applicable  
polypeptide ENSMUSP00000021567 Ensembl | MGI Sequence Detail 2344 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    649 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 22

    Microarray probesets 8
Other
Accession IDs
less
MGI:1921274, MGI:1923849, MGI:2144798, MGI:2144802
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory