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Pcnx
Gene Detail
 Symbol
Name
ID
Pcnx
pecanex homolog (Drosophila)
MGI:1891924
Synonyms 2900024E21Rik, 3526401J03Rik
Feature Type protein coding gene
Genetic Map
Chromosome 12
37.98 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:81860030-82000924 bp, + strand
From NCBI annotation of GRCm38

  140895 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40997  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Pcnx

Human
homologs
Human Homolog PCNX, pecanex homolog (Drosophila)
NCBI Gene ID 22990
neXtProt AC  NX_Q96RV3
Human Synonyms  PCNXL1
Human Chr (Location)  14q24.2; chr14:70907405-71115382 (+)  GRCh38
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (42)    Tissues (4)    Images (18)
Theiler Stages: 23
Assay TypeResults
RNA in situ 42
cDNA source data(20)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(22) cDNA(22)
Microarray probesets(8)
Other database
links
Ensembl Gene ModelENSMUSG00000021140 (Evidence)
Entrez Gene54604 (Evidence)
DFCITC1576662, TC1601131, TC1602300, TC1619450, TC1632163
DoTSDT.101185456, DT.101737115, DT.40142534, DT.531183, DT.99854588
NIA Mouse Gene IndexU014165
Consensus CDS ProjectCCDS26025.1
International Mouse Knockout Project StatusPcnx
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 54604 NCBI Gene Model | MGI Sequence Detail 140895 C57BL/6J ±  kb
transcript NM_018814 RefSeq | MGI Sequence Detail 12139 C57BL/6 
polypeptide Q9QYC1 UniProt | EBI | MGI Sequence Detail 2344 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(18) UniProt(3)
Polymorphisms SNPs within 2kb(649 from dbSNP Build 137)    SNPs within 2kb including multiple locations(651)
Protein-related
information
ResourceIDDescription
InterPro IPR007735 Pecanex
Protein Ontology PR:000012424 pecanex-like protein 1
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)
Other
accession IDs
MGI:1921274, MGI:1923849, MGI:2144798, MGI:2144802

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory