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Ncbp1 Gene Detail
Summary
  • Symbol
    Ncbp1
  • Name
    nuclear cap binding protein subunit 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891840
    NCBI Gene: 433702
Location & Maps
more
  • Sequence Map
    Chr4:46138613-46172403 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      33791 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 24.49 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    NCBP1, nuclear cap binding protein subunit 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    NCBP1, nuclear cap binding protein subunit 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CBP80, NCBP, Sto1
  • Links
    NCBI Gene ID: 4686
    neXtProt AC: NX_Q09161

  • Chr Location
    9q22.33; chr9:97633423-97673748 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    15
  • Endonuclease-mediated
    1
  • Gene trapped
    12
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006833 VEGA Gene Model | MGI Sequence Detail 33791 C57BL/6J ±  kb
transcript OTTMUST00000015791 VEGA | MGI Sequence Detail 3010 Not Applicable  
polypeptide OTTMUSP00000007257 VEGA | MGI Sequence Detail 790 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    175 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
Other
Accession IDs
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MGI:2140419, MGI:2140583
References
more
  • Summaries
    All 29
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:34628 Chadwick BP, et al., Nuclear cap binding protein maps close to the xeroderma pigmentosum complementation group A (XPA) locus in human and mouse. Genomics. 1996 1;35(3):632-3
  • Latest
    J:185950 Padmanabhan K, et al., Feedback regulation of transcriptional termination by the mammalian circadian clock PERIOD complex. Science. 2012 Aug 3;337(6094):599-602

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory