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Phax Gene Detail
Summary
  • Symbol
    Phax
  • Name
    phosphorylated adaptor for RNA export
  • Synonyms
    2810055C14Rik, 4933427L19Rik, D18Ertd65e, p55, Phax, phosphorylation regulated, Rnuxa
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891839
    NCBI Gene: 56698
  • Gene Overview
    MyGene.info: PHAX
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:56562569-56587712 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 30.63 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    146 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891839
protein coding gene Chr18:56562443-56587712 (.)
129S1/SvImJ MGP_129S1SvImJ_G0024442
protein coding gene Chr18:55932309-55958364 (+)
A/J MGP_AJ_G0024408
protein coding gene Chr18:53721668-53748979 (+)
AKR/J MGP_AKRJ_G0024378
protein coding gene Chr18:55188141-55216940 (+)
BALB/cJ MGP_BALBcJ_G0024408
protein coding gene Chr18:53905380-53930657 (+)
C3H/HeJ MGP_C3HHeJ_G0024175
protein coding gene Chr18:55413553-55440578 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024854
protein coding gene Chr18:57701412-57728542 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022286
protein coding gene Chr18:53359630-53384627 (+)
CAST/EiJ MGP_CASTEiJ_G0023649
protein coding gene Chr18:55429787-55460878 (+)
CBA/J MGP_CBAJ_G0024145
protein coding gene Chr18:59508898-59533879 (+)
DBA/2J MGP_DBA2J_G0024275
protein coding gene Chr18:53420002-53444855 (+)
FVB/NJ MGP_FVBNJ_G0024242
protein coding gene Chr18:52806879-52833657 (+)
LP/J MGP_LPJ_G0024360
protein coding gene Chr18:55894478-55921670 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024272
protein coding gene Chr18:61187178-61214534 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024901
protein coding gene Chr18:55309355-55336422 (+)
PWK/PhJ MGP_PWKPhJ_G0023393
protein coding gene Chr18:53434467-53460392 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023199
protein coding gene Chr18:55390415-55417180 (+)
WSB/EiJ MGP_WSBEiJ_G0023712
protein coding gene Chr18:55230704-55258540 (+)



Homology
more
  • Human Ortholog
    PHAX, phosphorylated adaptor for RNA export
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PHAX, phosphorylated adaptor for RNA export
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RNUXA
  • Links
    NCBI Gene ID: 51808
    neXtProt AC: NX_Q9H814
    UniProt: Q9H814

  • Chr Location
    5q23.2; chr5:126600915-126627252 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 10558
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PHAX
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 56698 NCBI Gene Model | MGI Sequence Detail 25144 C57BL/6J ±  kb
transcript NM_019996 RefSeq | MGI Sequence Detail 1893 C57BL/6  
polypeptide Q9JJT9 UniProt | EBI | MGI Sequence Detail 385 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000012630 phosphorylated adapter RNA export protein
  • InterPro Domains
    IPR039047 Phosphorylated adapter RNA export protein
    IPR019385 Phosphorylated adapter RNA export protein, RNA-binding domain
    IPR038092 Phosphorylated adapter RNA export protein, RNA-binding domain superfamily
Molecular
Reagents
less
  • All nucleic 61
    cDNA 60
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1098793, MGI:1918469, MGI:1919945, MGI:2147301, MGI:2147305
References
more
  • Summaries
    All 31
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory