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Tubd1 Gene Detail
Summary
  • Symbol
    Tubd1
  • Name
    tubulin, delta 1
  • Synonyms
    4930550G19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891826
    NCBI Gene: 56427
  • Gene Overview
    MyGene.info: TUBD1
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:86544991-86567360 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 51.82 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    71 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891826
protein coding gene Chr11:86544991-86567422 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018891
protein coding gene Chr11:88106631-88132308 (+)
A/J MGP_AJ_G0018858
protein coding gene Chr11:84721066-84743554 (+)
AKR/J MGP_AKRJ_G0018828
protein coding gene Chr11:87253697-87279126 (+)
BALB/cJ MGP_BALBcJ_G0018831
protein coding gene Chr11:85105939-85128752 (+)
C3H/HeJ MGP_C3HHeJ_G0018645
protein coding gene Chr11:87283062-87304852 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019283
protein coding gene Chr11:90774413-90797413 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016916
protein coding gene Chr11:81744166-81768506 (+)
CAST/EiJ MGP_CASTEiJ_G0018200
protein coding gene Chr11:87967750-87990390 (+)
CBA/J MGP_CBAJ_G0018616
protein coding gene Chr11:94593159-94615866 (+)
DBA/2J MGP_DBA2J_G0018724
protein coding gene Chr11:84292351-84313880 (+)
FVB/NJ MGP_FVBNJ_G0018713
protein coding gene Chr11:83794577-83816789 (+)
LP/J MGP_LPJ_G0018794
protein coding gene Chr11:88598502-88622966 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018740
protein coding gene Chr11:94695783-94719308 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019323
protein coding gene Chr11:87498807-87525377 (+)
PWK/PhJ MGP_PWKPhJ_G0017969
protein coding gene Chr11:85086456-85108447 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017761
protein coding gene Chr11:87053962-87078535 (+)
WSB/EiJ MGP_WSBEiJ_G0018251
protein coding gene Chr11:87372848-87395542 (+)



Homology
more
  • Human Ortholog
    TUBD1, tubulin delta 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TUBD1, tubulin delta 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TUBD
  • Links
    NCBI Gene ID: 51174
    neXtProt AC: NX_Q9UJT1
    UniProt: Q9UJT1

  • Chr Location
    17q23.1; chr17:59859467-59892948 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020513 Ensembl Gene Model | MGI Sequence Detail 22370 C57BL/6J ±  kb
transcript ENSMUST00000108030 Ensembl | MGI Sequence Detail 1964 Not Applicable  
polypeptide ENSMUSP00000103665 Ensembl | MGI Sequence Detail 486 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 51
    cDNA 51

    Microarray probesets 3
Other
Accession IDs
less
MGI:1922562
References
more
  • Summaries
    All 40
    Developmental Gene Expression 1
    Gene Ontology 7
    Phenotypes 13
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:253667 Pusapati GV, et al., CRISPR Screens Uncover Genes that Regulate Target Cell Sensitivity to the Morphogen Sonic Hedgehog. Dev Cell. 2018 Jan 8;44(1):113-129.e8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory