About   Help   FAQ
Chst7
Gene Detail
Symbol

Name
ID
Chst7
carbohydrate (N-acetylglucosamino) sulfotransferase 7
MGI:1891767
Synonyms
2600013M07Rik, C6ST-2, GST5
Feature Type
protein coding gene
Genetic Map
Chromosome X
15.50 cM, cytoband A3.1 - A3.2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:20059560-20097521 bp, + strand
From VEGA annotation of GRCm38

  37962 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10531  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: carbohydrate sulfotransferase
Gene Tree: Chst7

Human
homologs
Human Homolog CHST7, carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
NCBI Gene ID 56548
neXtProt AC  NX_Q9NS84
Human Synonyms  C6ST-2, GST-5
Human Chr (Location)  Xp11.23; chrX:46573687-46598496 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from APF )
Interactions
Chst7 interacts with 142 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (115)    Tissues (114)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 98
Northern blot 15
RT-PCR 2
cDNA source data(14)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(14) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000017058 (Evidence)
Ensembl Gene ModelENSMUSG00000037347 (Evidence)
Entrez Gene60322 (Evidence)
UniGene44827
DFCITC1582668
DoTSDT.101389578, DT.535156
NIA Mouse Gene IndexU019739
EC2.8.2.17, 2.8.2.-
Consensus CDS ProjectCCDS30040.1
International Mouse Knockout Project StatusChst7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017058 VEGA Gene Model | MGI Sequence Detail 37962 C57BL/6J ±  kb
transcript OTTMUST00000041312 VEGA | MGI Sequence Detail 2206 Not Applicable 
polypeptide OTTMUSP00000018547 VEGA | MGI Sequence Detail 484 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(75 from dbSNP Build 137)    SNPs within 2kb including multiple locations(77)
Protein-related
information
ResourceIDDescription
InterPro IPR016469 Carbohydrate sulfotransferase
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR000863 Sulfotransferase domain
Protein Ontology PR:000005480 carbohydrate sulfotransferase 7
References
(Earliest) J:63730 Uchimura K, et al., Diversity of N-acetylglucosamine-6-O-sulfotransferases: molecular cloning of a novel enzyme with different distribution and specificities. Biochem Biophys Res Commun. 2000 Aug 2;274(2):291-6
(Latest) J:133424 Akita K, et al., Expression of multiple chondroitin/dermatan sulfotransferases in the neurogenic regions of the embryonic and adult central nervous system implies that complex chondroitin sulfates have a role in neural stem cell maintenance. Stem Cells. 2008 Mar;26(3):798-809
All references(32)
Other
accession IDs
MGI:1919450

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/09/2014
MGI 5.20
The Jackson Laboratory