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Hnrnpr Gene Detail
Summary
  • Symbol
    Hnrnpr
  • Name
    heterogeneous nuclear ribonucleoprotein R
  • Synonyms
    2610003J05Rik, 2610528B01Rik, hnRNPR, Hnrpr
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891692
    NCBI Gene: 74326
  • Gene Overview
    MyGene.info: HNRNPR
Location & Maps
more
  • Sequence Map
    Chr4:136310942-136359447 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      48506 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 68.40 cM, cytoband D3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    HNRNPR, heterogeneous nuclear ribonucleoprotein R
  • Vertebrate Orthologs
    8
  • Human Ortholog
    HNRNPR, heterogeneous nuclear ribonucleoprotein R
    Orthology source: HomoloGene, HGNC
  • Synonyms
    hnRNP-R, HNRPR
  • Links
    NCBI Gene ID: 10236
    neXtProt AC: NX_O43390

  • Chr Location
    1p36.12; chr1:23304688-23344650 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    50
  • Chemically induced (other)
    2
  • Gene trapped
    45
  • Targeted
    3
  • Genomic Mutations
    3 involving Hnrnpr
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009867 VEGA Gene Model | MGI Sequence Detail 48506 C57BL/6J ±  kb
transcript OTTMUST00000022977 VEGA | MGI Sequence Detail 2683 Not Applicable  
polypeptide OTTMUSP00000010489 VEGA | MGI Sequence Detail 632 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    329 from dbSNP Build 142
Protein
Information
less
  • UniProt
    13 Sequences
  • InterPro Domains
    IPR006535 HnRNP R/Q splicing factor
    IPR012677 Nucleotide-binding alpha-beta plait domain
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 22
    cDNA 21
    Primer pair 1

    Microarray probesets 10
Other
Accession IDs
less
MGI:1917292, MGI:1921576
References
more
  • Summaries
    All 38
    Developmental Gene Expression 6
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:64914 Mizutani A, et al., SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms. J Biol Chem. 2000 Mar 31;275(13):9823-31
  • Latest
    J:222448 Dombert B, et al., Presynaptic localization of Smn and hnRNP R in axon terminals of embryonic and postnatal mouse motoneurons. PLoS One. 2014;9(10):e110846

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory