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Syncrip Gene Detail
Summary
  • Symbol
    Syncrip
  • Name
    synaptotagmin binding, cytoplasmic RNA interacting protein
  • Synonyms
    2610109K23Rik, 4632417O19Rik, GRY-RBP, hnRNP Q, Nsap1, Nsap1l, pp68, RRM RNA binding protein GRY-RBP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891690
    NCBI Gene: 56403
  • Gene Overview
    MyGene.info: SYNCRIP
Location & Maps
more
  • Sequence Map
    Chr9:88447009-88482574 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      35566 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 47.24 cM, cytoband E3.2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GRYRBP, GRY-RBP, hnRNP-Q, HNRNPQ, HNRPQ1, NSAP1, PP68
  • Links
    NCBI Gene ID: 10492
    neXtProt AC: NX_O60506

  • Chr Location
    6q14-q15; chr6:85607784-85643850 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    30
  • Chemically induced (other)
    1
  • Gene trapped
    27
  • Targeted
    2
  • Genomic Mutations
    1 involving Syncrip
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037703 VEGA Gene Model | MGI Sequence Detail 35566 C57BL/6J ±  kb
transcript OTTMUST00000097384 VEGA | MGI Sequence Detail 2944 Not Applicable  
polypeptide OTTMUSP00000054621 VEGA | MGI Sequence Detail 623 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    37 from dbSNP Build 142
Protein
Information
less
  • UniProt
    10 Sequences
  • Protein Ontology
    PR:000015874 heterogeneous nuclear ribonucleoprotein Q
  • InterPro Domains
    IPR006535 HnRNP R/Q splicing factor
    IPR012677 Nucleotide-binding alpha-beta plait domain
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 29
    cDNA 26
    Primer pair 3

    Microarray probesets 9
Other
Accession IDs
less
MGI:1914396, MGI:1925510, MGI:1930916
References
more
  • Summaries
    All 45
    Developmental Gene Expression 5
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:205543 Kim DY, et al., hnRNP Q regulates translation of p53 in normal and stress conditions. Cell Death Differ. 2013 Feb;20(2):226-34

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory