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Pde4dip
Gene Detail
 Symbol
Name
ID
Pde4dip
phosphodiesterase 4D interacting protein (myomegalin)
MGI:1891434
Synonyms 4732458A06Rik, 9430063L05Rik, D130016K21Rik, D3Bwg1078e, mKIAA0454, Usmg4
Feature Type protein coding gene
Genetic Map
Chromosome 3
42.28 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:97689824-97888707 bp, - strand
From VEGA annotation of GRCm38

  198884 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:66961  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Pde4dip

Human
homologs
Human Homolog PDE4DIP, phosphodiesterase 4D interacting protein
NCBI Gene ID 9659
neXtProt AC  NX_Q5VU43
Human Synonyms  CMYA2, MMGL
Human Chr (Location)  1q12; chr1:148808181-149033019 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pde4dip interacts with 291 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process cellular protein complex assembly
Component centrosome, cytoplasm, ...
Function enzyme binding, protein binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (162)    Tissues (138)    Images (41)
Theiler Stages: 22, 23, 24, 26, 27, 28
Assay TypeResults
RNA in situ 162
cDNA source data(174)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(179) cDNA(177) Primer pair(2)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000040172 (Evidence)
Ensembl Gene ModelENSMUSG00000038170 (Evidence)
Entrez Gene83679 (Evidence)
UniGene129840
DFCITC1574731, TC1578814, TC1586117, TC1604634, TC1606193, TC1624789, TC1668685, TC1686491, TC1707895, TC1719696
DoTSDT.101364727, DT.101402380, DT.101402382, DT.101720458, DT.111047915, DT.40181943, DT.490974, DT.525497, DT.55228916, DT.94249706, DT.99849164
NIA Mouse Gene IndexU024411
Consensus CDS ProjectCCDS38562.1, CCDS51012.1
International Mouse Knockout Project StatusPde4dip
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000040172 VEGA Gene Model | MGI Sequence Detail 198884 C57BL/6J ±  kb
transcript OTTMUST00000104435 VEGA | MGI Sequence Detail 8376 Not Applicable 
polypeptide OTTMUSP00000058447 VEGA | MGI Sequence Detail 2463 Not Applicable 

For the selected sequences
All sequences(146) RefSeq(44) UniProt(10)
Polymorphisms SNPs within 2kb(1189 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010630 Neuroblastoma breakpoint family (NBPF) domain
InterPro IPR012943 Spindle associated
InterPro IPR012934 Zinc finger, AD-type
Protein Ontology PR:000012476 myomegalin
References (Earliest) J:44483 Brady KP, et al., Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. Genome Res. 1997 Nov;7(11):1085-93
(Latest) J:177747 Overlack N, et al., Direct interaction of the Usher syndrome 1G protein SANS and myomegalin in the retina. Biochim Biophys Acta. 2011 Oct;1813(10):1883-92
All references(43)
Other
accession IDs
MGD-MRK-34220, MGI:106526, MGI:1924553, MGI:2140100, MGI:2442981, MGI:2443905

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory