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Crtap
Gene Detail
 Symbol
Name
ID
Crtap
cartilage associated protein
MGI:1891221
Synonyms 5730529N23Rik, CASP, Leprel3
Feature Type protein coding gene
Genetic Map
Chromosome 9
64.39 cM, cytoband F3-F4
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:114375134-114390675 bp, - strand
From VEGA annotation of GRCm38

  15542 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:21280  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 2 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Crtap

Human
homologs
Human Homolog CRTAP, cartilage associated protein
NCBI Gene ID 10491
neXtProt AC  NX_O75718
Human Synonyms  CASP, LEPREL3, OI7
Human Chr (Location)  3p22.3; chr3:33113958-33147773 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human CRTAP
Alleles
and
phenotypes
All alleles(4) : Gene trapped(2) Targeted(2)
 
Homozygotes develop kyphoscoliosis and osteoporosis as a result of defects in bone formation.
 
Human Diseases Modeled Using Mouse Crtap (1)    Alleles Annotated to Human Diseases(1)   
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process negative regulation of post-translational protein modification, peptidyl-proline hydroxylation to 3-hydroxy-L-proline, ...
Component endoplasmic reticulum, extracellular region, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (29)    Tissues (29)    Images (4)
Theiler Stages: 17, 20, 22, 24, 28
Assay TypeResults
Immunohistochemistry 3
RNA in situ 19
Northern blot 7
cDNA source data(69)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(71) Genomic(1) cDNA(70)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000033583 (Evidence)
Ensembl Gene ModelENSMUSG00000032431 (Evidence)
Entrez Gene56693 (Evidence)
UniGene20904
DFCITC1578524, TC1623520, TC1664150
DoTSDT.494411
NIA Mouse Gene IndexU031394
Consensus CDS ProjectCCDS23592.1
International Mouse Knockout Project StatusCrtap
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033583 VEGA Gene Model | MGI Sequence Detail 15542 C57BL/6J ±  kb
transcript OTTMUST00000084593 VEGA | MGI Sequence Detail 1674 Not Applicable 
polypeptide OTTMUSP00000045612 VEGA | MGI Sequence Detail 400 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(58 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000005900 cartilage-associated protein
References (Earliest) J:56594 Morello R, et al., cDNA cloning, characterization and chromosome mapping of Crtap encoding the mouse cartilage associated protein. Matrix Biol. 1999 Jun;18(3):319-24
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)
Other
accession IDs
MGI:1915200

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory