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Lhfpl1
Gene Detail
 Symbol
Name
ID
Lhfpl1
lipoma HMGIC fusion partner-like 1
MGI:1891214
Synonyms Lhfp
Feature Type protein coding gene
Genetic Map
Chromosome X
66.54 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:145290359-145349089 bp, - strand
From VEGA annotation of GRCm38

  58731 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18653  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: Lipoma HMGIC fusion partner precursor
Gene Tree: Lhfpl1

Human
homologs
Human Homolog LHFPL1, lipoma HMGIC fusion partner-like 1
NCBI Gene ID 340596
neXtProt AC  NX_Q86WI0
Human Chr (Location)  Xq23; chrX:112630651-112680147 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
Lhfpl1 interacts with 121 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (8)    Tissues (1)    Images (8)
Theiler Stages: 23
Assay TypeResults
RNA in situ 8
cDNA source data(3)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000018892 (Evidence)
Ensembl Gene ModelENSMUSG00000041700 (Evidence)
Entrez Gene237091 (Evidence)
UniGene135547
DFCITC1588744
DoTSDT.101363984
NIA Mouse Gene IndexU039762
Consensus CDS ProjectCCDS30458.1
International Mouse Knockout Project StatusLhfpl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018892 VEGA Gene Model | MGI Sequence Detail 58731 C57BL/6J ±  kb
transcript OTTMUST00000045430 VEGA | MGI Sequence Detail 1830 Not Applicable 
polypeptide OTTMUSP00000020431 VEGA | MGI Sequence Detail 220 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(12) UniProt(2)
Polymorphisms SNPs within 2kb(167 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019372 Lipoma HMGIC fusion partner-like protein
Protein Ontology PR:000009785 lipoma HMGIC fusion partner-like 1 protein
References (Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory