About   Help   FAQ
Oxct2a Gene Detail
Summary
  • Symbol
    Oxct2a
  • Name
    3-oxoacid CoA transferase 2A
  • Synonyms
    Oxct2, Scot-t1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891061
    NCBI Gene: 64059
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:123321875-123323634 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 57.42 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891061
protein coding gene Chr4:123321875-123323679 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028733
protein coding gene Chr4:124534338-124536097 (+)
A/J MGP_AJ_G0028692
protein coding gene Chr4:119672382-119676831 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0028715
protein coding gene Chr4:120258702-120260463 (+)
C3H/HeJ MGP_C3HHeJ_G0028430
protein coding gene Chr4:123019137-123022621 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027862
protein coding gene Chr4:121017838-121019399 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0028544
protein coding gene Chr4:120174401-120176251 (+)
FVB/NJ MGP_FVBNJ_G0028511
protein coding gene Chr4:118797211-118800233 (+)
LP/J MGP_LPJ_G0028645
protein coding gene Chr4:124814062-124817525 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029194
protein coding gene Chr4:123283220-123284892 (+)
PWK/PhJ MGP_PWKPhJ_G0027581
protein coding gene Chr4:116388378-116389975 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0027948
protein coding gene Chr4:123578070-123579634 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Oxct2a
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Male mice homozygous for a null allele exhibit normal fecundity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000076436 Ensembl Gene Model | MGI Sequence Detail 1760 C57BL/6J ±  kb
transcript ENSMUST00000102640 Ensembl | MGI Sequence Detail 1760 Not Applicable  
polypeptide ENSMUSP00000099700 Ensembl | MGI Sequence Detail 520 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    Genomic 1
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 7
  • Earliest
    J:65840 Koga M, et al., Isolation and characterization of a haploid germ cell-specific novel complementary deoxyribonucleic acid; testis-specific homologue of succinyl CoA:3-Oxo acid CoA transferase. Biol Reprod. 2000 Dec;63(6):1601-9
  • Latest
    J:279039 Lu Y, et al., CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched genes dispensable for male fertility in micedagger. Biol Reprod. 2019 Aug 1;101(2):501-511

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/05/2019
MGI 6.14
The Jackson Laboratory