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Ndufs5 Gene Detail
Summary
  • Symbol
    Ndufs5
  • Name
    NADH:ubiquinone oxidoreductase core subunit S5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1890889
    NCBI Gene: 595136
  • Gene Overview
    MyGene.info: NDUFS5
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:123712710-123718186 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 57.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1890889
protein coding gene Chr4:123712710-123718202 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028742
protein coding gene Chr4:125192241-125197375 (-)
A/J MGP_AJ_G0028701
protein coding gene Chr4:120304141-120310389 (-)
AKR/J MGP_AKRJ_G0028654
protein coding gene Chr4:123572213-123586813 (-)
BALB/cJ MGP_BALBcJ_G0028724
protein coding gene Chr4:120867949-120873415 (-)
C3H/HeJ MGP_C3HHeJ_G0028439
protein coding gene Chr4:123670034-123676036 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029165
protein coding gene Chr4:130005583-130012580 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026438
protein coding gene Chr4:113498443-113504283 (-)
CAST/EiJ MGP_CASTEiJ_G0027871
protein coding gene Chr4:121700981-121708178 (-)
CBA/J MGP_CBAJ_G0028404
protein coding gene Chr4:133298750-133304911 (-)
DBA/2J MGP_DBA2J_G0028553
protein coding gene Chr4:120784872-120794299 (-)
FVB/NJ MGP_FVBNJ_G0028520
protein coding gene Chr4:119413953-119420364 (-)
LP/J MGP_LPJ_G0028654
protein coding gene Chr4:125470551-125479007 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028546
protein coding gene Chr4:138251244-138256566 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029203
protein coding gene Chr4:123944708-123951089 (-)
PWK/PhJ MGP_PWKPhJ_G0027591
protein coding gene Chr4:117183238-117189268 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027418
protein coding gene Chr4:119735347-119742723 (-)
WSB/EiJ MGP_WSBEiJ_G0027950
protein coding gene Chr4:124004686-124011585 (-)



Homology
more
  • Human Ortholog
    NDUFS5, NADH:ubiquinone oxidoreductase subunit S5
  • Vertebrate Orthologs
    8
  • Human Ortholog
    NDUFS5, NADH:ubiquinone oxidoreductase subunit S5
    Orthology source: HGNC
  • Synonyms
    CI-15k, CI15K
  • Links
    NCBI Gene ID: 4725
    neXtProt AC: NX_O43920
    UniProt: O43920

  • Chr Location
    1p34.3; chr1:39026295-39034636 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    2
  • Gene trapped
    2
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Ndufs5
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 595136 NCBI Gene Model | MGI Sequence Detail 5477 C57BL/6J ±  kb
transcript NM_001030274 RefSeq | MGI Sequence Detail 540 C57BL/6  
polypeptide Q99LY9 UniProt | EBI | MGI Sequence Detail 106 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 84
    cDNA 84

    Microarray probesets 3
Other
Accession IDs
less
MGI:2146398
References
more
  • Summaries
    All 36
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory