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Rab9 Gene Detail
Summary
  • Symbol
    Rab9
  • Name
    RAB9, member RAS oncogene family
  • Synonyms
    2410064E05Rik, SID 99
  • Feature Type
    protein coding gene
  • IDs
    MGI:1890695
    NCBI Gene: 56382
  • Gene Overview
    MyGene.info: RAB9A
Location & Maps
more
  • Sequence Map
    ChrX:166457253-166479867 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      22615 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 77.47 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    RAB9A, RAB9A, member RAS oncogene family
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB9A, RAB9A, member RAS oncogene family
    Orthology source: HGNC, HomoloGene
  • Synonyms
    RAB9
  • Links
    NCBI Gene ID: 9367
    neXtProt AC: NX_P51151

  • Chr Location
    Xp22.2; chrX:13689121-13709825 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    3 phenotypes from multigenic genotypes
    2 images
    9 phenotype references
  • All Mutations and Alleles
    41
  • Gene trapped
    40
  • Transgenic
    1
  • Incidental Mutations
    APF
Male chimeras hemizygous for a gene trapped allele appear normal at E9.5.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019544 VEGA Gene Model | MGI Sequence Detail 22615 C57BL/6J ±  kb
transcript OTTMUST00000046680 VEGA | MGI Sequence Detail 876 Not Applicable  
polypeptide OTTMUSP00000021088 VEGA | MGI Sequence Detail 202 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    73 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000013644 ras-related protein Rab-9A
  • PDB
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR001806 Small GTPase superfamily
    IPR005225 Small GTP-binding protein domain
Molecular
Reagents
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  • All nucleic 59
    cDNA 59

    Microarray probesets 3
Other
Accession IDs
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MGI:1914627, MGI:2147853
References
more
  • Summaries
    All 35
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:233558 Zhang Z, et al., Crystal structure of the Rab9A-RUTBC2 RBD complex reveals the molecular basis for the binding specificity of Rab9A with RUTBC2. Structure. 2014 Oct 7;22(10):1408-20

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory