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Gabarapl2
Gene Detail
 Symbol
Name
ID
Gabarapl2
gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
MGI:1890602
Synonyms 0610012F20Rik, 2900019O08Rik, GATE-16, Gef2
Feature Type protein coding gene
Genetic Map
Chromosome 8
58.19 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr8:111940703-111953612 bp, + strand
From VEGA annotation of GRCm38

  12910 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68550  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: microtubule-associated proteins 1 light chain 3A/3B
Gene Tree: Gabarapl2

Human
homologs
Human Homolog GABARAPL2, GABA(A) receptor-associated protein-like 2
NCBI Gene ID 11345
neXtProt AC  NX_P60520
Human Synonyms  ATG8, ATG8C, GATE16, GATE-16, GEF2, GEF-2
Human Chr (Location)  16q22.1; chr16:75566351-75577881 (+)  GRCh38
Alleles
and
phenotypes
All alleles(74) : Targeted(1) Gene trapped(73)
Gene Ontology
(GO)
classifications
All GO classifications: (17 annotations)
Process autophagy, intra-Golgi vesicle-mediated transport, ...
Component autophagic vacuole, autophagic vacuole membrane, ...
Function protein binding
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(11)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(11) cDNA(11)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000031074 (Evidence)
Ensembl Gene ModelENSMUSG00000031950 (Evidence)
Entrez Gene93739 (Evidence)
DFCITC1573584
DoTSDT.110876031, DT.496189, DT.91425863, DT.94363782
Consensus CDS ProjectCCDS40480.1
International Mouse Knockout Project StatusGabarapl2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031074 VEGA Gene Model | MGI Sequence Detail 12910 C57BL/6J ±  kb
transcript OTTMUST00000076980 VEGA | MGI Sequence Detail 1677 Not Applicable 
polypeptide OTTMUSP00000040592 VEGA | MGI Sequence Detail 117 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(111 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004241 Autophagy protein Atg8 ubiquitin-like
Protein Ontology PR:000007759 gamma-aminobutyric acid receptor-associated protein-like 2
References (Earliest) J:63409 Kneussel M, et al., The gamma-aminobutyric acid type A receptor (GABAAR)-associated protein GABARAP interacts with gephyrin but is not involved in receptor anchoring at the synapse. Proc Natl Acad Sci U S A. 2000 Jul 18;97(15):8594-9
(Latest) J:170318 Itoh T, et al., OATL1, a novel autophagosome-resident Rab33B-GAP, regulates autophagosomal maturation. J Cell Biol. 2011 Mar 7;192(5):839-53
All references(37)
Other
accession IDs
MGI:1861743, MGI:1915608, MGI:1920098, MGI:2142469

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory