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Cbx3-ps3 Pseudogene Detail
Summary
  • Symbol
    Cbx3-ps3
  • Name
    chromobox 3, pseudogene 3
  • Synonyms
    OTTMUSG00000000828
Location &
Maps
more
  • Sequence Map
    Chr4:83619321-83620273 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 39.46 cM, cytoband C3-C5
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    5
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1890540
 pseudogene Chr4:83619217-83622732 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012739
 pseudogene Chr4:83306370-83307168 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0013037
 pseudogene Chr4:86592687-86594879 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0012676
 pseudogene Chr4:83671858-83673417 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0013043
 pseudogene Chr4:82551866-82553649 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Cbx3-ps3
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    10
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080793 Ensembl Gene Model | MGI Sequence Detail 953 C57BL/6J ±  kb
transcript ENSMUST00000118595 Ensembl | MGI Sequence Detail 550 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3706948
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:32398 Singh PB, et al., A sequence motif found in a Drosophila heterochromatin protein is conserved in animals and plants. Nucleic Acids Res. 1991 Feb 25;19(4):789-94
  • Latest
    J:75485 Jones DO, et al., The gene and pseudogenes of Cbx3/mHP1 gamma. DNA Seq. 2001;12(3):147-60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory