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Atp6v0b Gene Detail
Summary
  • Symbol
    Atp6v0b
  • Name
    ATPase, H+ transporting, lysosomal V0 subunit B
  • Synonyms
    2310024H13Rik, Atp6f, VMA16
  • Feature Type
    protein coding gene
  • IDs
    MGI:1890510
    NCBI Gene: 114143
  • Gene Overview
    MyGene.info: ATP6V0B
Location & Maps
more
  • Sequence Map
    Chr4:117884326-117887333 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3008 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 53.73 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    ATP6V0B, ATPase H+ transporting V0 subunit b
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATP6V0B, ATPase H+ transporting V0 subunit b
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ATP6F, HATPL, VMA16
  • Links
    NCBI Gene ID: 533
    neXtProt AC: NX_Q99437

  • Chr Location
    1p32.3; chr1:43974648-43978300 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    4 involving Atp6v0b
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008663 VEGA Gene Model | MGI Sequence Detail 3008 C57BL/6J ±  kb
transcript OTTMUST00000019636 VEGA | MGI Sequence Detail 1000 Not Applicable  
polypeptide OTTMUSP00000009000 VEGA | MGI Sequence Detail 205 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    27 from dbSNP Build 142
Protein
Information
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  • UniProt
    8 Sequences
  • Protein Ontology
    PR:000004474 V-type proton ATPase 21 kDa proteolipid subunit
  • InterPro Domains
    IPR000245 V-ATPase proteolipid subunit
    IPR002379 V-ATPase proteolipid subunit C-like domain
Molecular
Reagents
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  • All nucleic 121
    Genomic 1
    cDNA 119
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
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MGI:1913620
References
more
  • Summaries
    All 34
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory