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Cdc42se1 Gene Detail
Summary
  • Symbol
    Cdc42se1
  • Name
    CDC42 small effector 1
  • Synonyms
    1300002M12Rik, SCIP1, Spec1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1889510
    NCBI Gene: 57912
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr3:95228732-95236409 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7678 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.74 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CDC42SE1, CDC42 small effector 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CDC42SE1, CDC42 small effector 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SCIP1, SPEC1
  • Links
    NCBI Gene ID: 56882
    neXtProt AC: NX_Q9NRR8
    UniProt: Q9NRR8

  • Chr Location
    1q21.3; chr1:151050971-151059649 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    80
  • Chemically induced (other)
    1
  • Gene trapped
    75
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Cdc42se1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022348 VEGA Gene Model | MGI Sequence Detail 7678 C57BL/6J ±  kb
transcript OTTMUST00000053322 VEGA | MGI Sequence Detail 2805 Not Applicable  
polypeptide OTTMUSP00000025356 VEGA | MGI Sequence Detail 80 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    29 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 4
Other
Accession IDs
less
MGI:1914138, MGI:2140011
References
more
  • Summaries
    All 36
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 5
    Phenotypes 11
  • Earliest
    J:63564 Papanikolaou A, et al., Sequential and morphological analyses of aberrant crypt foci formation in mice of differing susceptibility to azoxymethane-induced colon carcinogenesis. Carcinogenesis. 2000 Aug;21(8):1567-72
  • Latest
    J:203028 Hasenpusch-Theil K, et al., Transcriptional analysis of Gli3 mutants identifies Wnt target genes in the developing hippocampus. Cereb Cortex. 2012 Dec;22(12):2878-93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory