About   Help   FAQ
Usp29 Gene Detail
Summary
  • Symbol
    Usp29
  • Name
    ubiquitin specific peptidase 29
  • Synonyms
    Ocat
  • Feature Type
    protein coding gene
  • IDs
    MGI:1888998
    NCBI Gene: 57775
Location & Maps
more
  • Sequence Map
    Chr7:6730578-6967219 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      236642 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 4.04 cM
  • Mapping Data
    10 experiments
Homology
more
  • Human Ortholog
    USP29, ubiquitin specific peptidase 29
  • Vertebrate Orthologs
    5
  • Human Ortholog
    USP29, ubiquitin specific peptidase 29
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HOM-TES-84/86
  • Links
    NCBI Gene ID: 57663
    neXtProt AC: NX_Q9HBJ7

  • Chr Location
    19q13.43; chr19:57120141-57131926 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    50
  • Chemically induced (ENU)
    3
  • Gene trapped
    47
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000054322 VEGA Gene Model | MGI Sequence Detail 236642 C57BL/6J ±  kb
transcript OTTMUST00000134780 VEGA | MGI Sequence Detail 7540 Not Applicable  
polypeptide OTTMUSP00000071443 VEGA | MGI Sequence Detail 869 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1311 from dbSNP Build 142
  • PCR
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000017167 ubiquitin carboxyl-terminal hydrolase 29
  • EC
  • InterPro Domains
    IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
    IPR032069 Ubiquitin carboxyl-terminal hydrolase 37, pleckstrin homology-like domain
    IPR033381 Ubiquitin-specific peptidase 29
    IPR018200 Ubiquitin specific protease, conserved site
    IPR028889 Ubiquitin specific protease domain
Molecular
Reagents
less
  • All nucleic 32
    Genomic 6
    cDNA 22
    Primer pair 4

    Microarray probesets 5
Other
Accession IDs
less
MGI:1861732
References
more
  • Summaries
    All 37
    Developmental Gene Expression 6
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:63606 Szeto IY, et al., Ocat, a paternally expressed gene closely linked and transcribed in the opposite direction to Peg3. Genomics. 2000 Jul 15;67(2):221-7
  • Latest
    J:206605 Faisal M, et al., Sexual differences of imprinted genes' expression levels. Gene. 2014 Jan 1;533(1):434-8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/27/2016
MGI 6.05
The Jackson Laboratory