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P3h1 Gene Detail
Summary
  • Symbol
    P3h1
  • Name
    prolyl 3-hydroxylase 1
  • Synonyms
    2410024C15Rik, Gros1, Lepre1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1888921
    NCBI Gene: 56401
Location & Maps
more
  • Sequence Map
    Chr4:119232915-119248975 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      16061 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 55.34 cM, cytoband D1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    P3H1, prolyl 3-hydroxylase 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    P3H1, prolyl 3-hydroxylase 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    GROS1, LEPRE1, OI8
  • Links
    NCBI Gene ID: 64175
    neXtProt AC: NX_Q32P28

  • Chr Location
    1p34.1; chr1:42746335-42767084 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 10509
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: P3H1
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with P3h1 mouse models; 1 with human P3H1 associations

Human Disease Mouse Models
       Osteogenesis Imperfecta, Type Viii; OI8   OMIM: 610915 View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    21 phenotypes from 2 alleles in 2 genetic backgrounds
    5 images
    21 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    13
  • Chemically induced (other)
    2
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    6
  • Genomic Mutations
    4 involving P3h1
  • Incidental Mutations
Mice homozygous for a knock-out allele exhibit reduced size, disproportional reduction in long bone length, decreased bone density, decreased bone mineral density, reduced body fat, delayed ossification, and abnormal collagen networks in the skin and tendons.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009225 VEGA Gene Model | MGI Sequence Detail 16061 C57BL/6J ±  kb
transcript OTTMUST00000020882 VEGA | MGI Sequence Detail 2977 Not Applicable  
polypeptide OTTMUSP00000009572 VEGA | MGI Sequence Detail 748 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    151 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000009759 prolyl 3-hydroxylase 1
  • EC
  • InterPro Domains
    IPR005123 Oxoglutarate/iron-dependent dioxygenase
    IPR006620 Prolyl 4-hydroxylase, alpha subunit
    IPR011990 Tetratricopeptide-like helical domain
Molecular
Reagents
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  • All nucleic 66
    cDNA 64
    Primer pair 2

    Microarray probesets 4
Other
Accession IDs
less
MGI:1919438
References
more
  • Summaries
    All 47
    Developmental Gene Expression 4
    Diseases 2
    Gene Ontology 7
    Phenotypes 21
  • Earliest
    J:95868 Wassenhove-McCarthy DJ, et al., Molecular characterization of a novel basement membrane-associated proteoglycan, leprecan. J Biol Chem. 1999 Aug 27;274(35):25004-17
  • Latest
    J:230866 Fratzl-Zelman N, et al., Bone matrix hypermineralization in prolyl-3 hydroxylase 1 deficient mice. Bone. 2016 Apr;85:15-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory