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Taf9 Gene Detail
Summary
  • Symbol
    Taf9
  • Name
    TATA-box binding protein associated factor 9
  • Synonyms
    2310012M09Rik, Taf2g
  • Feature Type
    protein coding gene
  • IDs
    MGI:1888697
    NCBI Gene: 108143
  • Gene Overview
    MyGene.info: TAF9
Location & Maps
more
  • Sequence Map
    Chr13:100651579-100656060 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4482 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 53.23 cM, cytoband D1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    TAF9, TATA-box binding protein associated factor 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TAF9, TATA-box binding protein associated factor 9
    Orthology source: HomoloGene
  • Synonyms
    MGC:5067, STAF31/32, TAF2G, TAFII31, TAFII-31, TAFII32, TAFII-32, TAFIID32
  • Links
    NCBI Gene ID: 6880
    neXtProt AC: NX_Q16594

  • Chr Location
    5q13.2; chr5:69364743-69370013 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049400 VEGA Gene Model | MGI Sequence Detail 4482 C57BL/6J ±  kb
transcript OTTMUST00000118703 VEGA | MGI Sequence Detail 1962 Not Applicable  
polypeptide OTTMUSP00000066247 VEGA | MGI Sequence Detail 264 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    10 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 6
Other
Accession IDs
less
MGI:1916866, MGI:2145171, MGI:2145378
References
more
  • Summaries
    All 32
    Developmental Gene Expression 8
    Gene Ontology 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:181994 Kamileri I, et al., Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria. Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2995-3000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory