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Otor Gene Detail
Summary
  • Symbol
    Otor
  • Name
    otoraplin
  • Synonyms
    Fdp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1888678
    NCBI Gene: 57329
  • Gene Overview
    MyGene.info: OTOR
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:143078492-143081700 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 70.89 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1888678
protein coding gene Chr2:143078473-143081713 (.)
129S1/SvImJ MGP_129S1SvImJ_G0026575
protein coding gene Chr2:147089827-147093067 (+)
A/J MGP_AJ_G0026539
protein coding gene Chr2:141123557-141126791 (+)
AKR/J MGP_AKRJ_G0026513
protein coding gene Chr2:145200367-145203603 (+)
BALB/cJ MGP_BALBcJ_G0026551
protein coding gene Chr2:141598261-141601501 (+)
C3H/HeJ MGP_C3HHeJ_G0026294
protein coding gene Chr2:145753206-145756446 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026996
protein coding gene Chr2:151518357-151521597 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024373
protein coding gene Chr2:135393720-135397011 (+)
CAST/EiJ MGP_CASTEiJ_G0025755
protein coding gene Chr2:146089065-146092313 (+)
CBA/J MGP_CBAJ_G0026274
protein coding gene Chr2:157062172-157065412 (+)
DBA/2J MGP_DBA2J_G0026408
protein coding gene Chr2:140460058-140463310 (+)
FVB/NJ MGP_FVBNJ_G0026372
protein coding gene Chr2:139024241-139027477 (+)
LP/J MGP_LPJ_G0026512
protein coding gene Chr2:147272390-147275630 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026392
protein coding gene Chr2:161262844-161266080 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027051
protein coding gene Chr2:145208870-145212122 (+)
PWK/PhJ MGP_PWKPhJ_G0025491
protein coding gene Chr2:140106552-140109813 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025292
protein coding gene Chr2:144256054-144259295 (+)
WSB/EiJ MGP_WSBEiJ_G0025828
protein coding gene Chr2:146207606-146210838 (+)



Homology
more
  • Human Ortholog
    OTOR, otoraplin
  • Vertebrate Orthologs
    9
  • Human Ortholog
    OTOR, otoraplin
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FDP, MIAL1
  • Links
    NCBI Gene ID: 56914
    neXtProt AC: NX_Q9NRC9
    UniProt: Q9NRC9

  • Chr Location
    20p12.1; chr20:16748353-16752164 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Otor
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 57329 NCBI Gene Model | MGI Sequence Detail 3209 C57BL/6J ±  kb
transcript NM_020595 RefSeq | MGI Sequence Detail 1042 Not Specified  
polypeptide Q9JIE3 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 6
    Primer pair 5
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Developmental Gene Expression 8
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:214677 Bohnenpoll T, et al., Canonical Wnt signaling regulates the proliferative expansion and differentiation of fibrocytes in the murine inner ear. Dev Biol. 2014 Jul 1;391(1):54-65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory