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Otor Gene Detail
Summary
  • Symbol
    Otor
  • Name
    otoraplin
  • Synonyms
    Fdp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1888678
    NCBI Gene: 57329
  • Gene Overview
    MyGene.info: OTOR
Location & Maps
more
  • Sequence Map
    Chr2:143078473-143081713 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3241 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 70.89 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    OTOR, otoraplin
  • Vertebrate Orthologs
    9
  • Human Ortholog
    OTOR, otoraplin
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FDP, MIAL1
  • Links
    NCBI Gene ID: 56914
    neXtProt AC: NX_Q9NRC9

  • Chr Location
    20p12.1-p11.23; chr20:16748353-16752164 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Otor
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015605 VEGA Gene Model | MGI Sequence Detail 3241 C57BL/6J ±  kb
transcript OTTMUST00000037062 VEGA | MGI Sequence Detail 949 Not Applicable  
polypeptide OTTMUSP00000016620 VEGA | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    82 from dbSNP Build 142
  • PCR
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 5
    Primer pair 4
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 8
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:63223 Robertson NG, et al., A novel conserved cochlear gene, OTOR: identification, expression analysis, and chromosomal mapping. Genomics. 2000 Jun 15;66(3):242-8
  • Latest
    J:214677 Bohnenpoll T, et al., Canonical Wnt signaling regulates the proliferative expansion and differentiation of fibrocytes in the murine inner ear. Dev Biol. 2014 Jul 1;391(1):54-65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory