About   Help   FAQ
Rbms2 Gene Detail
Summary
  • Symbol
    Rbms2
  • Name
    RNA binding motif, single stranded interacting protein 2
  • Synonyms
    2610315E04Rik, Scr3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861776
    NCBI Gene: 56516
  • Alliance
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:128131558-128180297 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 76.41 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    334 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861776
protein coding gene Chr10:128129470-128180297 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017849
protein coding gene Chr10:131808304-131873442 (-)
A/J MGP_AJ_G0017824
protein coding gene Chr10:126539019-126588282 (-)
AKR/J MGP_AKRJ_G0017787
protein coding gene Chr10:130270583-130316911 (-)
BALB/cJ MGP_BALBcJ_G0017788
protein coding gene Chr10:126924573-126971139 (-)
C3H/HeJ MGP_C3HHeJ_G0017611
protein coding gene Chr10:130418632-130469380 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018243
protein coding gene Chr10:136296852-136357938 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015921
protein coding gene Chr10:120496640-120543566 (-)
CAST/EiJ MGP_CASTEiJ_G0017172
protein coding gene Chr10:131126528-131174198 (-)
CBA/J MGP_CBAJ_G0017581
protein coding gene Chr10:141822519-141888635 (-)
DBA/2J MGP_DBA2J_G0017687
protein coding gene Chr10:125613183-125663250 (-)
FVB/NJ MGP_FVBNJ_G0017682
protein coding gene Chr10:124543347-124588834 (-)
LP/J MGP_LPJ_G0017761
protein coding gene Chr10:132423121-132478963 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017710
protein coding gene Chr10:144409790-144476135 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018283
protein coding gene Chr10:130351312-130411124 (-)
PWK/PhJ MGP_PWKPhJ_G0016957
protein coding gene Chr10:125858261-125906989 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016746
protein coding gene Chr10:129440780-129500846 (-)
WSB/EiJ MGP_WSBEiJ_G0017231
protein coding gene Chr10:130567533-130620272 (-)



Homology
more
  • Human Ortholog
    RBMS2, RNA binding motif single stranded interacting protein 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RBMS2, RNA binding motif single stranded interacting protein 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SCR3
  • Links
    NCBI Gene ID: 5939
    neXtProt AC: NX_Q15434
    UniProt: Q15434

  • Chr Location
    12q13.3; chr12:56521812-56596196 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040043 Ensembl Gene Model | MGI Sequence Detail 48740 C57BL/6J ±  kb
transcript ENSMUST00000092033 Ensembl | MGI Sequence Detail 1481 Not Applicable  
polypeptide ENSMUSP00000089664 Ensembl | MGI Sequence Detail 383 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000029712 RNA-binding motif, single-stranded-interacting protein 2
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR002343 Paraneoplastic encephalomyelitis antigen
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 99
    cDNA 98
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1914423
References
more
  • Summaries
    All 31
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:59635 Fujimoto M, et al., Structures and comparison of genomic and complementary DNAs of mouse MSSP, a c-Myc binding protein. Int J Oncol. 2000 Feb;16(2):245-51
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/13/2019
MGI 6.14
The Jackson Laboratory