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Nsmf
Gene Detail
 Symbol
Name
ID
Nsmf
NMDA receptor synaptonuclear signaling and neuronal migration factor
MGI:1861755
Synonyms Jacob, Nelf
Feature Type protein coding gene
Genetic Map
Chromosome 2
16.94 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:25054355-25062881 bp, + strand
From VEGA annotation of GRCm38

  8527 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10648  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 2 zebrafish

Gene Tree: Nsmf

Human
homologs
Human Homolog NSMF, NMDA receptor synaptonuclear signaling and neuronal migration factor
NCBI Gene ID 26012
neXtProt AC  NX_Q6X4W1
Human Synonyms  HH9, NELF
Human Chr (Location)  9q34.3; chr9:137447570-137459356 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human NSMF
Alleles
and
phenotypes
All alleles(1) : Targeted(1)
Gene Ontology
(GO)
classifications
All GO classifications: (31 annotations)
Process cellular response to amino acid stimulus, cellular response to electrical stimulus, ...
Component apical dendrite, cell junction, ...
Function calcium-dependent protein binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (80)    Tissues (47)    Images (30)
Theiler Stages: 19, 22, 23, 28
Assay TypeResults
RNA in situ 72
Northern blot 8
cDNA source data(81)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress
Molecular
reagents
All nucleic(85) cDNA(84) Other(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000011615 (Evidence)
Ensembl Gene ModelENSMUSG00000006476 (Evidence)
Entrez Gene56876 (Evidence)
UniGene42956
DFCITC1572320, TC1590902, TC1591425, TC1594053, TC1601456, TC1756884
DoTSDT.101236720, DT.101381780, DT.101738330, DT.103579358, DT.530129, DT.91388530, DT.94374462, DT.97359086, DT.99865463
NIA Mouse Gene IndexU001474
Consensus CDS ProjectCCDS15745.1, CCDS15746.1, CCDS15747.1, CCDS50523.1
International Mouse Knockout Project StatusNsmf
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011615 VEGA Gene Model | MGI Sequence Detail 8527 C57BL/6J ±  kb
transcript OTTMUST00000027151 VEGA | MGI Sequence Detail 2957 Not Applicable 
polypeptide OTTMUSP00000012357 VEGA | MGI Sequence Detail 532 Not Applicable 

For the selected sequences
All sequences(121) RefSeq(22) UniProt(10)
Polymorphisms SNPs within 2kb(44 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000048 IQ motif, EF-hand binding site
InterPro IPR027401 Myosin-like IQ motif-containing domain
Protein Ontology PR:000011136 nasal embryonic luteinizing hormone-releasing hormone factor
References (Earliest) J:63404 Kramer PR, et al., Novel gene expressed in nasal region influences outgrowth of olfactory axons and migration of luteinizing hormone-releasing hormone (LHRH) neurons. Genes Dev. 2000 Jul 15;14(14):1824-34
(Latest) J:184159 Antypa M, et al., Differential gene expression in migratory streams of cortical interneurons. Eur J Neurosci. 2011 Nov;34(10):1584-94
All references(35)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory