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Nom1 Gene Detail
Summary
  • Symbol
    Nom1
  • Name
    nucleolar protein with MIF4G domain 1
  • Synonyms
    D5Kng1, Gm1040, LOC381627
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861749
    NCBI Gene: 433864
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:29637338-29658504 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 15.00 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    576 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861749
 protein coding gene Chr5:29637338-29662841 (+)
129S1/SvImJ ENSMUSG00200010316
 protein coding gene Chr5:25116620-25139805 (+)
A/J ENSMUSG00195043721
 protein coding gene Chr5:24578631-24601813 (+)
AKR/J ENSMUSG00220008135
 protein coding gene Chr5:24582432-24605613 (+)
BALB/cJ ENSMUSG00180032042
 protein coding gene Chr5:24383261-24406444 (+)
C3H/HeJ ENSMUSG00175043031
 protein coding gene Chr5:26357703-26380882 (+)
C57BL/6NJ ENSMUSG00215037210
 protein coding gene Chr5:25102015-25125198 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027043
 protein coding gene Chr5:24001270-24025439 (+)
CAST/EiJ ENSTCUG00005018816
 protein coding gene Chr5:24548543-24571637 (+)
CBA/J ENSMUSG00210042108
 protein coding gene Chr5:25330926-25354106 (+)
DBA/2J ENSMUSG00185032397
 protein coding gene Chr5:27193366-27216547 (+)
FVB/NJ ENSMUSG00205016573
 protein coding gene Chr5:24091115-24114299 (+)
JF1/MsJ ENSUMUG00000051925
 protein coding gene Chr5:31717036-31740171 (+)
LP/J ENSMUSG00230046619
 protein coding gene Chr5:31801206-31824385 (+)
NOD/ShiLtJ ENSMUSG00190011802
 protein coding gene Chr5:24390472-24413651 (+)
NZO/HlLtJ ENSMUSG00225019530
 protein coding gene Chr5:37018058-37041238 (+)
PWK/PhJ ENSLUMG00010036028
 protein coding gene Chr5:24486103-24509217 (+)
SPRET/EiJ ENSMSPG00010042189
 protein coding gene Chr5:25628965-25652237 (+)
WSB/EiJ ENSIUOG00005038719
 protein coding gene Chr5:27275440-27298609 (+)



Homology
more
  • Human Ortholog
    NOM1, nucleolar protein with MIF4G domain 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NOM1, nucleolar protein with MIF4G domain 1
  • Synonyms
    C7orf3, PPP1R113, SGD1
  • Links
    NCBI Gene ID: 64434
    UniProt: Q5C9Z4

  • Chr Location
    7q36.3; chr7:156949712-156973176 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    28 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    3
  • Gene trapped
    1
  • Radiation induced
    3
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    6 involving Nom1
  • Incidental Mutations
    Mutagenetix , APF
  • Find Mice (IMSR)
    34 strains or lines available
Female mice heterozygous for a knock-out allele show anomalies in the growth phase of the hair cycle (anagen).
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    657
  • Tissues
    13
  • cDNA Data
    43
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 433864 NCBI Gene Model | MGI Sequence Detail 21167 C57BL/6J ±  kb
transcript NR_153385 RefSeq | MGI Sequence Detail 3583 ZRU/MplStud  
polypeptide Q3UFM5 UniProt | EBI | MGI Sequence Detail 854 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 44
    cDNA 43
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2685886
References
more
  • Summaries
    All 56
    Developmental Gene Expression 4
    Diseases 1
    Gene Ontology 7
    Phenotypes 28
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory