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Rnf32 Gene Detail
Summary
  • Symbol
    Rnf32
  • Name
    ring finger protein 32
  • Synonyms
    1700009J01Rik, 2700025B22Rik, 4930542N22Rik, Lmbr2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861747
    NCBI Gene: 56874
  • Gene Overview
    MyGene.info: RNF32
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:29195185-29227635 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 14.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    125 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861747
 protein coding gene Chr5:29195185-29228457 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029373
 protein coding gene Chr5:27102461-27138195 (+)
A/J MGP_AJ_G0029339
 protein coding gene Chr5:26193106-26231265 (+)
AKR/J MGP_AKRJ_G0029290
 protein coding gene Chr5:27263425-27295290 (+)
BALB/cJ MGP_BALBcJ_G0029350
 protein coding gene Chr5:26743117-26775652 (+)
C3H/HeJ MGP_C3HHeJ_G0029071
 protein coding gene Chr5:27294986-27327032 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029803
 protein coding gene Chr5:28765960-28797178 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027041
 protein coding gene Chr5:23771914-23805096 (+)
CAST/EiJ MGP_CASTEiJ_G0028482
 protein coding gene Chr5:26385516-26419775 (+)
CBA/J MGP_CBAJ_G0029039
 protein coding gene Chr5:29262329-29297709 (+)
DBA/2J MGP_DBA2J_G0029188
 protein coding gene Chr5:26415207-26446899 (+)
FVB/NJ MGP_FVBNJ_G0029146
 protein coding gene Chr5:25828127-25860730 (+)
LP/J MGP_LPJ_G0029273
 protein coding gene Chr5:27560422-27595261 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029175
 protein coding gene Chr5:30271270-30307518 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029837
 protein coding gene Chr5:26864325-26896184 (+)
PWK/PhJ MGP_PWKPhJ_G0028206
 protein coding gene Chr5:25518955-25551632 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028037
 protein coding gene Chr5:26158759-26191047 (+)
WSB/EiJ MGP_WSBEiJ_G0028562
 protein coding gene Chr5:26883772-26917987 (+)



Homology
more
  • Human Ortholog
    RNF32, ring finger protein 32
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RNF32, ring finger protein 32
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FKSG33, HSD15, LMBR2
  • Links
    NCBI Gene ID: 140545
    neXtProt AC: NX_Q9H0A6
    UniProt: Q9H0A6

  • Chr Location
    7q36.3; chr7:156640286-156678333 (+)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 10986
    1 human;1 mouse;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RNF32
  • Gene Tree
    Rnf32
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    87
  • Tissues
    42
  • cDNA Data
    10
  • Literature Summary
    8
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 56874 NCBI Gene Model | MGI Sequence Detail 32451 C57BL/6J ±  kb
transcript NM_001289757 RefSeq | MGI Sequence Detail 1606 C57BL/6  
polypeptide Q9JIT1 UniProt | EBI | MGI Sequence Detail 368 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1913574, MGI:1919854, MGI:1923082
References
more
  • Summaries
    All 54
    Developmental Gene Expression 8
    Diseases 1
    Gene Ontology 3
    Phenotypes 27
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:244162 Sagai T, et al., Evolution of Shh endoderm enhancers during morphological transition from ventral lungs to dorsal gas bladder. Nat Commun. 2017 Feb 03;8:14300
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/06/2018
MGI 6.13 		The Jackson Laboratory