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Pcnx3 Gene Detail
Summary
  • Symbol
    Pcnx3
  • Name
    pecanex homolog 3
  • Synonyms
    Pcnxl3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861733
    NCBI Gene: 104401
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:5664635-5688908 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 4.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861733
protein coding gene Chr19:5664635-5688908 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024721
protein coding gene Chr19:2649757-2673317 (-)
A/J MGP_AJ_G0024687
protein coding gene Chr19:2504186-2528034 (-)
AKR/J MGP_AKRJ_G0024660
protein coding gene Chr19:2570625-2594473 (-)
BALB/cJ MGP_BALBcJ_G0024687
protein coding gene Chr19:2498527-2522429 (-)
C3H/HeJ MGP_C3HHeJ_G0024455
protein coding gene Chr19:2588818-2612720 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025134
protein coding gene Chr19:2717409-2740961 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022564
protein coding gene Chr19:2413153-2436769 (-)
CAST/EiJ MGP_CASTEiJ_G0023927
protein coding gene Chr19:2606000-2632105 (-)
CBA/J MGP_CBAJ_G0024427
protein coding gene Chr19:2839581-2866448 (-)
DBA/2J MGP_DBA2J_G0024554
protein coding gene Chr19:2500422-2523971 (-)
FVB/NJ MGP_FVBNJ_G0024520
protein coding gene Chr19:2496756-2521193 (-)
LP/J MGP_LPJ_G0024640
protein coding gene Chr19:2625114-2649275 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024550
protein coding gene Chr19:2684734-2711014 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025182
protein coding gene Chr19:2591157-2614709 (-)
PWK/PhJ MGP_PWKPhJ_G0023673
protein coding gene Chr19:2522469-2546494 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023478
protein coding gene Chr19:2574296-2598994 (-)
WSB/EiJ MGP_WSBEiJ_G0023989
protein coding gene Chr19:2600972-2624555 (-)



Homology
more
  • Human Ortholog
    PCNX3, pecanex 3
  • Vertebrate Orthologs
    7
  • Human Ortholog
    PCNX3, pecanex 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PCNXL3
  • Links
    NCBI Gene ID: 399909
    neXtProt AC: NX_Q9H6A9
    UniProt: Q9H6A9

  • Chr Location
    11q13.1; chr11:65614311-65637439 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 104401 NCBI Gene Model | MGI Sequence Detail 24274 C57BL/6J ±  kb
transcript NM_144868 RefSeq | MGI Sequence Detail 7281 C57BL/6  
polypeptide Q8VI59 UniProt | EBI | MGI Sequence Detail 2028 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 117
    Genomic 4
    cDNA 113

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:63233 Saridaki A, et al., Genomic sequencing reveals the structure of the Kcnk6 and map3k11 genes and their close vicinity to the sipa1 gene on mouse chromosome 19. Cytogenet Cell Genet. 2000;89(1-2):85-8
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory