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Tssc4 Gene Detail
Summary
  • Symbol
    Tssc4
  • Name
    tumor-suppressing subchromosomal transferable fragment 4
  • Synonyms
    ESTM671070
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861712
    NCBI Gene: 56844
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:143069249-143071093 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 88.11 cM
  • Mapping Data
    9 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861712
protein coding gene Chr7:143068092-143071093 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033270
protein coding gene Chr7:148350125-148351969 (+)
A/J MGP_AJ_G0033253
protein coding gene Chr7:144051364-144053208 (+)
AKR/J MGP_AKRJ_G0033184
protein coding gene Chr7:148101713-148103557 (+)
BALB/cJ MGP_BALBcJ_G0033253
protein coding gene Chr7:143827576-143829420 (+)
C3H/HeJ MGP_C3HHeJ_G0032969
protein coding gene Chr7:147864371-147866215 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033763
protein coding gene Chr7:153713910-153715754 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030736
protein coding gene Chr7:145264634-145266477 (+)
CAST/EiJ MGP_CASTEiJ_G0032291
protein coding gene Chr7:140167744-140169581 (+)
CBA/J MGP_CBAJ_G0032940
protein coding gene Chr7:158973571-158975415 (+)
DBA/2J MGP_DBA2J_G0033094
protein coding gene Chr7:142025679-142027523 (+)
FVB/NJ MGP_FVBNJ_G0033042
protein coding gene Chr7:141946301-141948145 (+)
LP/J MGP_LPJ_G0033186
protein coding gene Chr7:149868963-149870807 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033076
protein coding gene Chr7:159568889-159570733 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033783
protein coding gene Chr7:147065038-147066882 (+)
PWK/PhJ MGP_PWKPhJ_G0032000
protein coding gene Chr7:135328330-135330173 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031846
protein coding gene Chr7:133870926-133872770 (+)
WSB/EiJ MGP_WSBEiJ_G0032403
protein coding gene Chr7:148065580-148067424 (+)



Homology
more
  • Human Ortholog
    TSSC4, tumor suppressing subtransferable candidate 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TSSC4, tumor suppressing subtransferable candidate 4
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 10078
    neXtProt AC: NX_Q9Y5U2
    UniProt: Q9Y5U2

  • Chr Location
    11p15.5; chr11:2400409-2403878 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 4169
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TSSC4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045752 Ensembl Gene Model | MGI Sequence Detail 1845 C57BL/6J ±  kb
transcript ENSMUST00000177841 Ensembl | MGI Sequence Detail 1364 Not Applicable  
polypeptide ENSMUSP00000137399 Ensembl | MGI Sequence Detail 317 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 107
    Genomic 10
    cDNA 92
    Primer pair 5

    Microarray probesets 3
Other
Accession IDs
less
MGI:1342282
References
more
  • Summaries
    All 43
    Developmental Gene Expression 13
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:10529 Bastian H, et al., A murine even-skipped homologue, Evx 1, is expressed during early embryogenesis and neurogenesis in a biphasic manner [published erratum appears in EMBO J 1991 Dec;10(12):3978]. EMBO J. 1990 Jun;9(6):1839-52
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory