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Aldh9a1
Gene Detail
Symbol

Name
ID
Aldh9a1
aldehyde dehydrogenase 9, subfamily A1
MGI:1861622
Synonyms
ESTM40, TMABA-DH
Feature Type
protein coding gene
Genetic Map
Chromosome 1
74.74 cM, cytoband H2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr1:167349991-167368532 bp, + strand
From VEGA annotation of GRCm38

  18542 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:55483  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: ALDH9A1
Protein SuperFamily: NAD-dependent aldehyde dehydrogenase
Gene Tree: Aldh9a1

Human
homologs
ALDH9A1, aldehyde dehydrogenase 9 family, member A1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 223
neXtProt AC: NX_P49189

Human Synonyms: ALDH4, ALDH7, ALDH9, E3, TMABADH

Human Chr (Location): 1q23.1; chr1:165662212-165698663 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Aldh9a1 interacts with 138 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (134)    Tissues (134)    Images (12)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 134
cDNA source data(185)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase aldh9a1 ; ZFIN aldh9a1a.1, aldh9a1b    NEW 
Molecular
reagents
All nucleic(187) cDNA(185) Primer pair(2)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000050636 (Evidence)
Ensembl Gene Model ENSMUSG00000026687 (Evidence)
Entrez Gene 56752 (Evidence)
UniGene 330055
DFCI TC1572145, TC1729406, TC1745711
DoTS DT.101400547, DT.535923
NIA Mouse Gene Index U001056
EC 1.2.1.3, 1.2.1.47
Consensus CDS Project CCDS35765.1
International Mouse Phenotyping Consortium Status Aldh9a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000050636 VEGA Gene Model | MGI Sequence Detail 18542 C57BL/6J ±  kb
transcript OTTMUST00000128376 VEGA | MGI Sequence Detail 2835 Not Applicable 
polypeptide OTTMUSP00000069072 VEGA | MGI Sequence Detail 518 Not Applicable 

For the selected sequences
All sequences(69) RefSeq(4) UniProt(9)
Polymorphisms
SNPs within 2kb(166 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016160 Aldehyde dehydrogenase, conserved site
InterPro IPR016163 Aldehyde dehydrogenase, C-terminal
InterPro IPR015590 Aldehyde dehydrogenase domain
InterPro IPR016162 Aldehyde dehydrogenase, N-terminal
InterPro IPR016161 Aldehyde/histidinol dehydrogenase
Protein Ontology PR:000003933 4-trimethylaminobutyraldehyde dehydrogenase
References
(Earliest) J:52606 Eddleston J, et al., Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp). Genomics. 1999 Mar 1;56(2):149-59
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(40)
Other
accession IDs
MGI:1334434

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory