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Aldh9a1 Gene Detail
Summary
  • Symbol
    Aldh9a1
  • Name
    aldehyde dehydrogenase 9, subfamily A1
  • Synonyms
    ESTM40, TMABA-DH
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861622
    NCBI Gene: 56752
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:167349991-167368530 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 74.74 cM, cytoband H2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    157 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861622
protein coding gene Chr1:167349991-167368532 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016713
protein coding gene Chr1:172912433-172932935 (+)
A/J MGP_AJ_G0016693
protein coding gene Chr1:165860029-165882421 (+)
AKR/J MGP_AKRJ_G0016659
protein coding gene Chr1:170873802-170894165 (+)
BALB/cJ MGP_BALBcJ_G0016654
protein coding gene Chr1:166345188-166364423 (+)
C3H/HeJ MGP_C3HHeJ_G0016478
protein coding gene Chr1:171105814-171124875 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017115
protein coding gene Chr1:178703464-178725133 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014824
protein coding gene Chr1:157705343-157724056 (+)
CAST/EiJ MGP_CASTEiJ_G0016058
protein coding gene Chr1:170713635-170733274 (+)
CBA/J MGP_CBAJ_G0016453
protein coding gene Chr1:185046278-185064767 (+)
DBA/2J MGP_DBA2J_G0016559
protein coding gene Chr1:164704400-164725107 (+)
FVB/NJ MGP_FVBNJ_G0016557
protein coding gene Chr1:163153637-163172409 (+)
LP/J MGP_LPJ_G0016630
protein coding gene Chr1:173986075-174006529 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016582
protein coding gene Chr1:192444331-192466123 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017152
protein coding gene Chr1:170745038-170763510 (+)
PWK/PhJ MGP_PWKPhJ_G0015844
protein coding gene Chr1:163910481-163929586 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015630
protein coding gene Chr1:169520420-169538851 (+)
WSB/EiJ MGP_WSBEiJ_G0016120
protein coding gene Chr1:170840193-170858688 (+)



Homology
more
  • Human Ortholog
    ALDH9A1, aldehyde dehydrogenase 9 family member A1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    ALDH9A1, aldehyde dehydrogenase 9 family member A1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ALDH4, ALDH7, ALDH9, E3, TMABADH
  • Links
    NCBI Gene ID: 223
    neXtProt AC: NX_P49189
    UniProt: P49189

  • Chr Location
    1q24.1; chr1:165662212-165698663 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 56752 NCBI Gene Model | MGI Sequence Detail 18540 C57BL/6J ±  kb
    transcript NM_019993 RefSeq | MGI Sequence Detail 2833 C57BL/6  
    polypeptide Q9JLJ2 UniProt | EBI | MGI Sequence Detail 494 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 188
      cDNA 186
      Primer pair 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1334434
    References
    more
    • Summaries
      All 45
      Developmental Gene Expression 5
      Gene Ontology 8
      Phenotypes 10
    • Earliest
      J:52606 Eddleston J, et al., Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp). Genomics. 1999 Mar 1;56(2):149-59
    • Latest
      J:240028 Bulusu V, et al., Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development. Dev Cell. 2017 Feb 27;40(4):331-341.e4

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory