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Rpl36 Gene Detail
Summary
  • Symbol
    Rpl36
  • Name
    ribosomal protein L36
  • Feature Type
    protein coding gene
  • IDs
    MGI:1860603
    NCBI Gene: 54217
  • Gene Overview
    MyGene.info: RPL36
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:56613395-56614243 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 29.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    60 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1860603
protein coding gene Chr17:56613395-56614246 (.)
129S1/SvImJ MGP_129S1SvImJ_G0023931
protein coding gene Chr17:58316531-58317297 (+)
A/J MGP_AJ_G0023889
protein coding gene Chr17:56725826-56726674 (+)
AKR/J MGP_AKRJ_G0023858
protein coding gene Chr17:57423149-57423915 (+)
BALB/cJ MGP_BALBcJ_G0023890
protein coding gene Chr17:56542492-56543340 (+)
C3H/HeJ MGP_C3HHeJ_G0023654
protein coding gene Chr17:58156644-58157247 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024336
protein coding gene Chr17:60574787-60575635 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021782
protein coding gene Chr17:53198980-53199833 (+)
CAST/EiJ MGP_CASTEiJ_G0023136
protein coding gene Chr17:58434923-58435771 (+)
CBA/J MGP_CBAJ_G0023630
protein coding gene Chr17:62948850-62950307 (+)
DBA/2J MGP_DBA2J_G0023758
protein coding gene Chr17:55424921-55427792 (+)
FVB/NJ MGP_FVBNJ_G0023724
protein coding gene Chr17:54962853-54963701 (+)
LP/J MGP_LPJ_G0023840
protein coding gene Chr17:59004778-59005381 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023752
protein coding gene Chr17:62440013-62440861 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024380
protein coding gene Chr17:57787308-57788156 (+)
PWK/PhJ MGP_PWKPhJ_G0022882
protein coding gene Chr17:54785568-54787216 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022693
protein coding gene Chr17:54554347-54555113 (+)
WSB/EiJ MGP_WSBEiJ_G0023202
protein coding gene Chr17:58398674-58399240 (+)



Homology
more
  • Human Ortholog
    RPL36, ribosomal protein L36
  • Vertebrate Orthologs
    6
  • Human Ortholog
    RPL36, ribosomal protein L36
    Orthology source: HGNC
  • Synonyms
    L36
  • Links
    NCBI Gene ID: 25873
    neXtProt AC: NX_Q9Y3U8
    UniProt: Q9Y3U8

  • Chr Location
    19p13.3; chr19:5690261-5691667 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057863 Ensembl Gene Model | MGI Sequence Detail 849 C57BL/6J ±  kb
transcript ENSMUST00000080492 Ensembl | MGI Sequence Detail 383 Not Applicable  
polypeptide ENSMUSP00000079340 Ensembl | MGI Sequence Detail 105 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR000509 Ribosomal protein L36e
    IPR038097 Ribosomal protein L36e domain superfamily
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 10
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory