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Ammecr1 Gene Detail
Summary
  • Symbol
    Ammecr1
  • Name
    AMMECR nuclear protein 1
  • Synonyms
    6230420G18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1860206
    NCBI Gene: 56068
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:141634142-141749722 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome X, 63.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    598 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1860206
protein coding gene ChrX:141634142-141749724 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036152
protein coding gene ChrX:140382148-140496298 (-)
A/J MGP_AJ_G0036129
protein coding gene ChrX:139768446-139874872 (-)
AKR/J MGP_AKRJ_G0036055
protein coding gene ChrX:144241939-144359641 (-)
BALB/cJ MGP_BALBcJ_G0036120
protein coding gene ChrX:137986937-138102662 (-)
C3H/HeJ MGP_C3HHeJ_G0035828
protein coding gene ChrX:140478972-140593086 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036643
protein coding gene ChrX:144387474-144496080 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033467
protein coding gene ChrX:131305583-131413682 (-)
CAST/EiJ MGP_CASTEiJ_G0035119
protein coding gene ChrX:121187277-121297067 (-)
CBA/J MGP_CBAJ_G0035805
protein coding gene ChrX:148912309-149041382 (-)
DBA/2J MGP_DBA2J_G0035963
protein coding gene ChrX:138826187-138937886 (-)
FVB/NJ MGP_FVBNJ_G0035897
protein coding gene ChrX:138051206-138165161 (-)
LP/J MGP_LPJ_G0036054
protein coding gene ChrX:141341990-141451136 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035933
protein coding gene ChrX:156550397-156670990 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036680
protein coding gene ChrX:139691099-139799823 (-)
PWK/PhJ MGP_PWKPhJ_G0034813
protein coding gene ChrX:117994007-118102261 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034638
protein coding gene ChrX:121718394-121832796 (-)
WSB/EiJ MGP_WSBEiJ_G0035254
protein coding gene ChrX:138060949-138168850 (-)



Homology
more
  • Human Ortholog
    AMMECR1, AMMECR nuclear protein 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    AMMECR1, AMMECR nuclear protein 1
  • Synonyms
    AMMERC1, MFHIEN
  • Links
    NCBI Gene ID: 9949
    neXtProt AC: NX_Q9Y4X0
    UniProt: Q9Y4X0

  • Chr Location
    Xq23; chrX:110194186-110440318 (-)  GRCh38

Human Diseases
more
  • Diseases
    1 with human AMMECR1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 images
    8 phenotype references
Male chimeras hemizygous for a gene trapped allele appear normal at E9.5.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 56068 NCBI Gene Model | MGI Sequence Detail 115581 C57BL/6J ±  kb
transcript NM_019496 RefSeq | MGI Sequence Detail 5435 C57BL/6  
polypeptide Q9JHT5 UniProt | EBI | MGI Sequence Detail 344 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    Genomic 1
    cDNA 25

    Microarray probesets 2
Other
Accession IDs
less
MGI:1923390
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:62787 Vitelli F, et al., Identification and characterization of mouse orthologs of the AMMECR1 and FACL4 genes deleted in AMME syndrome: orthology of Xq22.3 and MmuXF1-F3. Cytogenet Cell Genet. 2000;88(3-4):259-63
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory