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Gp9
Gene Detail
 Symbol
Name
ID
Gp9
glycoprotein 9 (platelet)
MGI:1860137
Synonyms Cd42, GPIX
Feature Type protein coding gene
Genetic Map
Chromosome 6
39.13 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:87778136-87779762 bp, + strand
From NCBI annotation of GRCm38

  1627 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:144  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Protein SuperFamily: platelet glycoprotein IX
Gene Tree: Gp9

Human
homologs
Human Homolog GP9, glycoprotein IX (platelet)
NCBI Gene ID 2815
neXtProt AC  NX_P14770
Human Synonyms  CD42a, GPIX
Human Chr (Location)  3q21.3; chr3:129056617-129062411 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human GP9
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Interactions
Gp9 interacts with 39 markers (Mir124a-1, Mir124a-2, Mir124a-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process blood coagulation, cell adhesion, ...
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (6)    Tissues (1)   
Theiler Stages: 19
Assay TypeResults
RT-PCR 6
cDNA source data(4)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) cDNA(4) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000030054 (Evidence)
Entrez Gene54368 (Evidence)
UniGene12897
DFCITC1586240
DoTSDT.485592
NIA Mouse Gene IndexU007137
Consensus CDS ProjectCCDS20328.1
International Mouse Knockout Project StatusGp9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 54368 NCBI Gene Model | MGI Sequence Detail 1627 C57BL/6J ±  kb
transcript NM_018762 RefSeq | MGI Sequence Detail 811 Not Specified 
polypeptide O88186 UniProt | EBI | MGI Sequence Detail 177 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(8) UniProt(1)
Polymorphisms SNPs within 2kb(27 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000483 Cysteine-rich flanking region, C-terminal
InterPro IPR000372 Leucine-rich repeat-containing N-terminal
Protein Ontology PR:000001906 platelet glycoprotein IX
Graphical View of Protein Domain Structure
References (Earliest) J:51437 Kitaguchi T, et al., Characterization of cDNA encoding full-length mouse platelet glycoprotein IX. Blood Coagul Fibrinolysis. 1998 Jun;9(4):381-5
(Latest) J:168396 Cosemans JM, et al., Key role of glycoprotein Ib/V/IX and von Willebrand factor in platelet activation-dependent fibrin formation at low shear flow. Blood. 2011 Jan 13;117(2):651-60
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory