Cd320
Gene Detail

Symbol Name ID

Cd320 CD320 antigen MGI:1860083

Synonyms

425O18-1, 8D6, D17Ertd716e, NG29, TCblR, VLDL

Feature Type

protein coding gene

Genetic Map

Chromosome 17

17.98 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr17:33843091-33849774 bp, + strand From VEGA annotation of GRCm38   6684 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:9573  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: CD320 antigen
Gene Tree: Cd320

Human homologs

Human Homolog		CD320, CD320 molecule
NCBI Gene ID		51293
neXtProt AC		NX_Q9NPF0
Human Synonyms		8D6, 8D6A, TCBLR
Human Chr (Location)		19p13.3-p13.2; chr19:8367011-8373240 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human CD320

Alleles and phenotypes

All alleles(5) : Targeted(1) Gene trapped(4)
 

The homozygous mutant and heterozygous mice exhibited an increased mean retinal artery-to-vein ratio when compared with controls.

 

Gene Ontology (GO) classifications

All GO classifications: (7 annotations)

Process	biological_process
Component	endoplasmic reticulum, integral to membrane, ...
Function	cobalamin binding, growth factor activity

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (9)    Tissues (9)   
Theiler Stages: 9, 16, 28

Assay Type	Results
RT-PCR	9

cDNA source data(63)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(67) Genomic(1) cDNA(64) Primer pair(2)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000037211 (Evidence)
Ensembl Gene Model	ENSMUSG00000002308 (Evidence)
Entrez Gene	54219 (Evidence)
UniGene	11175
DFCI	TC1577662
DoTS	DT.101353920, DT.532987, DT.55209305
NIA Mouse Gene Index	U017830
Consensus CDS Project	CCDS28632.1
International Mouse Knockout Project Status	Cd320

Sequences

Length	Strain/Species
genomic	OTTMUSG00000037211	VEGA Gene Model | MGI Sequence Detail	6684	C57BL/6J
transcript	OTTMUST00000095957	VEGA | MGI Sequence Detail	2209	Not Applicable
polypeptide	OTTMUSP00000053572	VEGA | MGI Sequence Detail	260	Not Applicable

All sequences(32) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(73 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR023415	Low-density lipoprotein (LDL) receptor class A, conserved site
InterPro	IPR002172	Low-density lipoprotein (LDL) receptor class A repeat
Protein Ontology	PR:000001306	CD320 molecule

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(40)

Other accession IDs

MGI:1289153