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Ctnnal1 Gene Detail
Summary
  • Symbol
    Ctnnal1
  • Name
    catenin (cadherin associated protein), alpha-like 1
  • Synonyms
    ACRP, Catnal1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859649
    NCBI Gene: 54366
  • Gene Overview
    MyGene.info: CTNNAL1
Location & Maps
more
  • Sequence Map
    Chr4:56810935-56865188 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      54254 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 31.66 cM, cytoband C1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CTNNAL1, catenin alpha like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CTNNAL1, catenin alpha like 1
    Orthology source: HomoloGene
  • Synonyms
    ACRP, alpha-CATU, CLLP
  • Links
    NCBI Gene ID: 8727
    neXtProt AC: NX_Q9UBT7

  • Chr Location
    9q31.2; chr9:108942569-109018802 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    11 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007317 VEGA Gene Model | MGI Sequence Detail 54254 C57BL/6J ±  kb
transcript OTTMUST00000016921 VEGA | MGI Sequence Detail 3664 Not Applicable  
polypeptide OTTMUSP00000007798 VEGA | MGI Sequence Detail 731 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    283 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 6
Other
Accession IDs
less
MGI:2140345, MGI:2140586, MGI:2140700
References
more
  • Summaries
    All 38
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:229960 Acar M, et al., Deep imaging of bone marrow shows non-dividing stem cells are mainly perisinusoidal. Nature. 2015 Oct 1;526(7571):126-30

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory