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Gpkow Gene Detail
Summary
  • Symbol
    Gpkow
  • Name
    G patch domain and KOW motifs
  • Synonyms
    DXErtd697e, DXImx41e, mT54, T54
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859610
    NCBI Gene: 209416
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:7697131-7710262 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 3.47 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859610
protein coding gene ChrX:7697125-7710265 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035519
protein coding gene ChrX:2310405-2323533 (+)
A/J MGP_AJ_G0035497
protein coding gene ChrX:2274088-2287045 (+)
AKR/J MGP_AKRJ_G0035430
protein coding gene ChrX:2383634-2398408 (+)
BALB/cJ MGP_BALBcJ_G0035493
protein coding gene ChrX:2293743-2307465 (+)
C3H/HeJ MGP_C3HHeJ_G0035201
protein coding gene ChrX:2345631-2369640 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036017
protein coding gene ChrX:2387872-2403263 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032893
protein coding gene ChrX:1838286-1851524 (+)
CAST/EiJ MGP_CASTEiJ_G0034502
protein coding gene ChrX:2245142-2262565 (+)
CBA/J MGP_CBAJ_G0035171
protein coding gene ChrX:2511095-2528622 (+)
DBA/2J MGP_DBA2J_G0035328
protein coding gene ChrX:2297059-2310660 (+)
FVB/NJ MGP_FVBNJ_G0035275
protein coding gene ChrX:2256503-2269540 (+)
LP/J MGP_LPJ_G0035406
protein coding gene ChrX:2333758-2336446 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035315
protein coding gene ChrX:2472018-2485063 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036035
protein coding gene ChrX:2298357-2311886 (+)
PWK/PhJ MGP_PWKPhJ_G0034203
protein coding gene ChrX:2232308-2245912 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034041
protein coding gene ChrX:2273706-2278162 (+)
WSB/EiJ MGP_WSBEiJ_G0034625
protein coding gene ChrX:2301637-2316362 (+)



Homology
more
  • Human Ortholog
    GPKOW, G-patch domain and KOW motifs
  • Vertebrate Orthologs
    6
  • Human Ortholog
    GPKOW, G-patch domain and KOW motifs
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GPATC5, GPATCH5, Spp2, T54
  • Links
    NCBI Gene ID: 27238
    neXtProt AC: NX_Q92917
    UniProt: Q92917

  • Chr Location
    Xp11.23; chrX:49113385-49124547 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031148 Ensembl Gene Model | MGI Sequence Detail 13132 C57BL/6J ±  kb
transcript ENSMUST00000049896 Ensembl | MGI Sequence Detail 3579 Not Applicable  
polypeptide ENSMUSP00000076178 Ensembl | MGI Sequence Detail 488 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 78
    Genomic 5
    cDNA 72
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1277185
References
more
  • Summaries
    All 30
    Gene Ontology 3
    Phenotypes 1
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory