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Cd164 Gene Detail
Summary
  • Symbol
    Cd164
  • Name
    CD164 antigen
  • Synonyms
    A115, A24, MGC-24
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859568
    NCBI Gene: 53599
  • Gene Overview
    MyGene.info: CD164
  • Alliance
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:41519500-41531042 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 22.46 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859568
protein coding gene Chr10:41519414-41531048 (.)
129S1/SvImJ MGP_129S1SvImJ_G0017176
protein coding gene Chr10:40162302-40173894 (+)
A/J MGP_AJ_G0017153
protein coding gene Chr10:39044047-39055655 (+)
AKR/J MGP_AKRJ_G0017113
protein coding gene Chr10:39633251-39646291 (+)
BALB/cJ MGP_BALBcJ_G0017115
protein coding gene Chr10:39112630-39124534 (+)
C3H/HeJ MGP_C3HHeJ_G0016936
protein coding gene Chr10:39956165-39968550 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017574
protein coding gene Chr10:41388050-41399672 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015270
protein coding gene Chr10:36984164-36994889 (+)
CAST/EiJ MGP_CASTEiJ_G0016515
protein coding gene Chr10:40149798-40161295 (+)
CBA/J MGP_CBAJ_G0016910
protein coding gene Chr10:43275963-43295058 (+)
DBA/2J MGP_DBA2J_G0017015
protein coding gene Chr10:38548804-38560409 (+)
FVB/NJ MGP_FVBNJ_G0017010
protein coding gene Chr10:38047837-38059760 (+)
LP/J MGP_LPJ_G0017092
protein coding gene Chr10:40157473-40170285 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017040
protein coding gene Chr10:44094172-44105813 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017611
protein coding gene Chr10:39610907-39622475 (+)
PWK/PhJ MGP_PWKPhJ_G0016295
protein coding gene Chr10:38425166-38437525 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016079
protein coding gene Chr10:39427962-39439506 (+)
WSB/EiJ MGP_WSBEiJ_G0016578
protein coding gene Chr10:39937193-39948821 (+)



Homology
more
  • Human Ortholog
    CD164, CD164 molecule
  • Vertebrate Orthologs
    6
  • Human Ortholog
    CD164, CD164 molecule
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DFNA66, endolyn, MGC-24, MGC-24v, MUC-24
  • Links
    NCBI Gene ID: 8763
    neXtProt AC: NX_Q04900
    UniProt: Q04900

  • Chr Location
    6q21; chr6:109366514-109382559 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human CD164 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Cd164
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 53599 NCBI Gene Model | MGI Sequence Detail 11543 C57BL/6J ±  kb
transcript NM_016898 RefSeq | MGI Sequence Detail 2830 C57BL/6  
polypeptide Q9R0L9 UniProt | EBI | MGI Sequence Detail 197 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 420
    cDNA 419
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143502, MGI:2143853
References
more
  • Summaries
    All 45
    Developmental Gene Expression 6
    Gene Ontology 7
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory