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Lrrc6
Gene Detail
 Symbol
Name
ID
Lrrc6
leucine rich repeat containing 6 (testis)
MGI:1859553
Synonyms LRTP
Feature Type protein coding gene
Genetic Map
Chromosome 15
29.22 cM, cytoband D3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr15:66379858-66500910 bp, - strand
From VEGA annotation of GRCm38

  121053 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:34534  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Lrrc6

Human
homologs
Human Homolog LRRC6, leucine rich repeat containing 6
NCBI Gene ID 23639
neXtProt AC  NX_Q86X45
Human Synonyms  CILD19, LRTP, TSLRP
Human Chr (Location)  8q24.22; chr8:132570419-132684968 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human LRRC6
Alleles
and
phenotypes
All alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process cilium movement, epithelial cilium movement involved in determination of left/right asymmetry, ...
Component cell projection, cilium, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(9)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000037898 (Evidence)
Ensembl Gene ModelENSMUSG00000022375 (Evidence)
Entrez Gene54562 (Evidence)
UniGene244890
DFCITC1584226
DoTSDT.40141158
NIA Mouse Gene IndexU036242
Consensus CDS ProjectCCDS49620.1
International Mouse Knockout Project StatusLrrc6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037898 VEGA Gene Model | MGI Sequence Detail 121053 C57BL/6J ±  kb
transcript OTTMUST00000097713 VEGA | MGI Sequence Detail 2084 Not Applicable 
polypeptide OTTMUSP00000054804 VEGA | MGI Sequence Detail 473 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(586 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001611 Leucine-rich repeat
InterPro IPR003603 U2A'/phosphoprotein 32 family A, C-terminal
Protein Ontology PR:000009939 leucine-rich repeat-containing protein 6
References (Earliest) J:61958 Xue JC, et al., Identification of a novel testis-specific leucine-rich protein in humans and mice. Biol Reprod. 2000 May;62(5):1278-84
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory