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Rps28 Gene Detail
Summary
  • Symbol
    Rps28
  • Name
    ribosomal protein S28
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859516
    NCBI Gene: 54127
  • Gene Overview
    MyGene.info: RPS28
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:33823036-33824562 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859516
protein coding gene Chr17:33819027-33824562 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023538
protein coding gene Chr17:33758640-33764175 (-)
A/J MGP_AJ_G0023497
protein coding gene Chr17:32597927-32603458 (-)
AKR/J MGP_AKRJ_G0023463
protein coding gene Chr17:32975791-32981322 (-)
BALB/cJ MGP_BALBcJ_G0023501
protein coding gene Chr17:32743801-32749224 (-)
C3H/HeJ MGP_C3HHeJ_G0023264
protein coding gene Chr17:33323688-33330313 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023945
protein coding gene Chr17:35014916-35022434 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021418
protein coding gene Chr17:30106073-30111535 (-)
CAST/EiJ MGP_CASTEiJ_G0022766
protein coding gene Chr17:33439393-33444941 (-)
CBA/J MGP_CBAJ_G0023240
protein coding gene Chr17:36403750-36409281 (-)
DBA/2J MGP_DBA2J_G0023369
protein coding gene Chr17:31976402-31981825 (-)
FVB/NJ MGP_FVBNJ_G0023338
protein coding gene Chr17:31833576-31839099 (-)
LP/J MGP_LPJ_G0023447
protein coding gene Chr17:34032098-34037630 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023358
protein coding gene Chr17:35462753-35468275 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023985
protein coding gene Chr17:33310915-33316448 (-)
PWK/PhJ MGP_PWKPhJ_G0022514
protein coding gene Chr17:30870192-30875725 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022330
protein coding gene Chr17:31274729-31280285 (-)
WSB/EiJ MGP_WSBEiJ_G0022825
protein coding gene Chr17:33345403-33350936 (-)



Homology
more
  • Human Ortholog
    RPS28, ribosomal protein S28
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPS28, ribosomal protein S28
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DBA15, eS28, S28
  • Links
    NCBI Gene ID: 6234
    neXtProt AC: NX_P62857
    UniProt: P62857

  • Chr Location
    19p13.2; chr19:8321500-8322396 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 2 alleles in 1 genetic background
    7 phenotype references
Mice homozygous for a gene trap allele are viable and fertile.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 54127 NCBI Gene Model | MGI Sequence Detail 1527 C57BL/6J ±  kb
transcript NM_001355384 RefSeq | MGI Sequence Detail 396 C57BL/6  
polypeptide P62858 UniProt | EBI | MGI Sequence Detail 69 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR012340 Nucleic acid-binding, OB-fold
    IPR000289 Ribosomal protein S28e
    IPR028626 Ribosomal protein S28e conserved site
Molecular
Reagents
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  • All nucleic 6
    cDNA 5
    Primer pair 1

    Microarray probesets 11
References
more
  • Summaries
    All 32
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 7
  • Earliest
    J:29553 Hassouna N, et al., The complete nucleotide sequence of mouse 28S rRNA gene. Implications for the process of size increase of the large subunit rRNA in higher eukaryotes. Nucleic Acids Res. 1984 Apr 25;12(8):3563-83
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory