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Cldn7 Gene Detail
Summary
  • Symbol
    Cldn7
  • Name
    claudin 7
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859285
    NCBI Gene: 53624
  • Gene Overview
    MyGene.info: CLDN7
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:69964779-69967885 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 42.94 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859285
protein coding gene Chr11:69964779-69967886 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018572
protein coding gene Chr11:70454654-70457719 (+)
A/J MGP_AJ_G0018540
protein coding gene Chr11:67789360-67792425 (+)
AKR/J MGP_AKRJ_G0018509
protein coding gene Chr11:69809673-69812738 (+)
BALB/cJ MGP_BALBcJ_G0018512
protein coding gene Chr11:68118463-68121528 (+)
C3H/HeJ MGP_C3HHeJ_G0018325
protein coding gene Chr11:69847931-69852548 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018963
protein coding gene Chr11:72580539-72583604 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016608
protein coding gene Chr11:64714690-64717800 (+)
CAST/EiJ MGP_CASTEiJ_G0017880
protein coding gene Chr11:70091864-70094931 (+)
CBA/J MGP_CBAJ_G0018297
protein coding gene Chr11:75835253-75838318 (+)
DBA/2J MGP_DBA2J_G0018407
protein coding gene Chr11:67372206-67375272 (+)
FVB/NJ MGP_FVBNJ_G0018397
protein coding gene Chr11:67021146-67024211 (+)
LP/J MGP_LPJ_G0018477
protein coding gene Chr11:71039457-71042522 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018420
protein coding gene Chr11:76426224-76429289 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019005
protein coding gene Chr11:70083316-70086381 (+)
PWK/PhJ MGP_PWKPhJ_G0017654
protein coding gene Chr11:68025407-68028473 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017444
protein coding gene Chr11:69901966-69905030 (+)
WSB/EiJ MGP_WSBEiJ_G0017934
protein coding gene Chr11:69747191-69750256 (+)



Homology
more
  • Human Ortholog
    CLDN7, claudin 7
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CLDN7, claudin 7
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CEPTRL2, claudin-1, CLDN-7, CPETRL2, Hs.84359
  • Links
    NCBI Gene ID: 1366
    neXtProt AC: NX_O95471
    UniProt: O95471

  • Chr Location
    17p13.1; chr17:7259903-7263193 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    15 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit decreased body size, weight, and length; abnormal potassium, chloride, and sodium ion excretion; chronic dehydration; and postnatal lethality by P12.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
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    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000018569 Ensembl Gene Model | MGI Sequence Detail 3107 C57BL/6J ±  kb
    transcript ENSMUST00000108597 Ensembl | MGI Sequence Detail 913 Not Applicable  
    polypeptide ENSMUSP00000104238 Ensembl | MGI Sequence Detail 211 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 174
      cDNA 169
      Primer pair 4
      Other 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 72
      Developmental Gene Expression 24
      Gene Ontology 10
      Phenotypes 14
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:265031 Sequeira I, et al., Immunomodulatory role of Keratin 76 in oral and gastric cancer. Nat Commun. 2018 Aug 24;9(1):3437

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory